Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq3801 113 3e-23 seq3059 77.0 2e-12 >seq3801 Length=200 Score = 113 bits (124), Expect = 3e-23 Identities = 97/119 (82%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58 ||||||||||||||||||||||| || ||||| || |||| ||| | ||| | Sbjct 16 GAACCCAAAGACTTTGATTTCTCATACGGTGCTGACAAGGTCATTAAAAGTAAACGACTG 75 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || ||||| ||||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 76 CCAATCCCGAGTCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGA 134 >seq3059 Length=271 Score = 77.0 bits (84), Expect = 2e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 || ||||| ||||||||||||||| |||||||||||||| ||||||| ||| ||||| Sbjct 15 CCAATCCCGAGTCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTC 71 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278386386240