Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2137 381 1e-103 seq1050 185 1e-44 seq327 109 9e-22 seq4331 80.6 5e-13 >seq2137 Length=955 Score = 381 bits (422), Expect = 1e-103 Identities = 243/264 (92%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 618 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 559 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| || ||| |||| ||||| ||||||||||||||||| Sbjct 558 TTAGTGGGTGAACAATCCAACAATTGGCGAGTTCTACTTCGCAATGATAGGAAGAGCCGA 499 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 498 CATCGAAGAATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCC 439 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||||| | | ||||||||||||||||| Sbjct 438 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCAAAAGAACTAAAGGATCGATAGG 379 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||||| |||||||||||| Sbjct 378 CCACGCTTTCACGGTTTGTATTCA 355 >seq1050 Length=7825 Score = 185 bits (204), Expect = 1e-44 Identities = 117/127 (92%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 168 GCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTG 227 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTG 60 Query 228 GCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTT 287 ||||||||||| | ||||| | | ||||||||||||||||||||| |||||| ||||| Sbjct 61 GCACCTCTAGCTTAAAATTCAAAAGAACTAAAGGATCGATAGGCCACGCTTTCACGGTTT 120 Query 288 GTATTCA 294 ||||||| Sbjct 121 GTATTCA 127 >seq327 Length=28287 Score = 109 bits (120), Expect = 9e-22 Identities = 62/63 (98%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 5734 AAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 5675 Query 225 CTG 227 ||| Sbjct 5674 CTG 5672 >seq4331 Length=176 Score = 80.6 bits (88), Expect = 5e-13 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAG 77 |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 47 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854355434496