Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2622 100 3e-19 seq4614 93.3 4e-17 seq3059 73.4 4e-11 >seq2622 Length=418 Score = 100 bits (110), Expect = 3e-19 Identities = 85/103 (83%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC----GAATACATTACCA 68 |||||| |||||||||||||| ||| ||||||||| ||||||| |||||||||| || Sbjct 303 TTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTCATTTGAATACATTAGCA 362 Query 69 TGGAATAATAGAATA-GGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||||||| ||| || | || | |||||||||| ||||| Sbjct 363 TGGAATAATAAGATACGGCCTTGGTGGTCTATTTTGTTGGTTT 405 >seq4614 Length=170 Score = 93.3 bits (102), Expect = 4e-17 Identities = 83/102 (81%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC---GAATACATTACCAT 69 |||||| |||||||||||||| ||| ||||||||| ||||||| |||||| | | ||| Sbjct 115 TTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTCATTGAATACTTCAGCAT 56 Query 70 GGAATAATAGAATAGGA-CGTGCGGTTCTATTTTGTAGGTTT 110 ||||||||| ||| || | || | |||||||||| ||||| Sbjct 55 GGAATAATAAGATACGACCTTGGTGGTCTATTTTGTTGGTTT 14 >seq3059 Length=271 Score = 73.4 bits (80), Expect = 4e-11 Identities = 90/121 (74%), Gaps = 3/121 (2%) Strand=Plus/Minus Query 67 CATGGAATAATAGAATAGGACGTGCG-GTTCTATTTTGTAGGTTTCTAGGACCGCCCGTA 125 |||||||||||| ||| ||| | | | |||||||||| ||||| | | | ||| Sbjct 265 CATGGAATAATAAGATACGACCTTGGTGGTCTATTTTGTTGGTTTGCACACCAGG--GTA 208 Query 126 ATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 ||||| |||| ||| ||| |||||| | |||| | |||| |||||||||||||||| Sbjct 207 ATGATTAATAGGGACAGTTGGGGGTATTCATATTTCAGCGTCAGAGGTGAAATTCTTGGA 148 Query 186 T 186 | Sbjct 147 T 147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511974128640