Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3043 244 3e-62 seq2066 244 3e-62 seq3152 228 2e-57 >seq3043 Length=272 Score = 244 bits (270), Expect = 3e-62 Identities = 221/274 (81%), Gaps = 12/274 (4%) Strand=Plus/Plus Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1 CCCTGTGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 60 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||| ||||||||||||||||||| |||||||||||||||||||||||| || |||||||| Sbjct 61 TCTAAGGCTCCCTCTCCGGAATCAAACCCTAATTCCCCGTTACCCGTTAATGCCATGGTA 120 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||| |||| |||||||||||||| | | || ||||| | Sbjct 121 GGCCCATATCCTACCATCCAAAGCTGATAGGGCAGAAACTCAATCGATTTATCGC--ACA 178 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA----AGGAGCCCCGAAG-GGCG 295 ||| |||||| || ||||||||||| ||| || | ||||| ||| || Sbjct 179 AAAG----TGCGATCCGCACAGTTATTATGATTCAACACAATACCAGCCCGAAAGCTGCA 234 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCGA 329 |||| ||| ||||||||||| | ||| |||| Sbjct 235 TTGG-TTTCAATCTAATAAATGCTACCCGCCCGA 267 >seq2066 Length=1117 Score = 244 bits (270), Expect = 3e-62 Identities = 212/256 (83%), Gaps = 13/256 (5%) Strand=Plus/Minus Query 261 AGTTATTATGAATCACCA-AGGAGC--CCCGAAGG--GCGTTGGTTTTTTATCTAATAAA 315 ||||||||||| ||| || | | | ||||||| || ||||||| |||||||||| Sbjct 1075 AGTTATTATGATTCAACACAACACCAGCCCGAAGACTGCATTGGTTTCA-ATCTAATAAA 1017 Query 316 TACACCCCTTCCGAAGTCG-----GGGTTTTTA-GCATGTATTAGCTCTAGAATTACCAC 369 | | ||| ||| | | |||| |||| ||||||||||||||||||||||| || Sbjct 1016 TGCTACCCGCCCGTATACACAGTTGGGTATTTATGCATGTATTAGCTCTAGAATTACTAC 957 Query 370 GGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGC 429 ||||||||| |||||||||||||||| | || || ||||||||| ||||||||||||||| Sbjct 956 GGTTATCCAAGTAGTAAGGTACTATCGAGTAGACTATAACTGATATAATGAGCCATTCGC 897 Query 430 AGTTTCACTGTA-TAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGC 488 |||||||| ||| | |||| ||||||||||||||||||||||||||||||||||||||| Sbjct 896 AGTTTCACAGTACAAAATTGTTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGC 837 Query 489 ATATGACTACTGGCAG 504 ||||||||||||||| Sbjct 836 GTATGACTACTGGCAG 821 >seq3152 Length=258 Score = 228 bits (252), Expect = 2e-57 Identities = 157/176 (89%), Gaps = 1/176 (1%) Strand=Plus/Minus Query 330 AGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT 389 ||| ||| || | ||||||||||||||||||||||| |||| |||||| |||||||||| Sbjct 239 AGTTGGGTATTGTTGCATGTATTAGCTCTAGAATTACTACGGGTATCCAAGTAGTAAGGT 180 Query 390 ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTG 448 |||||| | || || ||||||||| ||||||||||||||||||||||| ||| | |||| Sbjct 179 ACTATCGAGTAGACTATAACTGATATAATGAGCCATTCGCAGTTTCACAGTACAAAATTG 120 Query 449 CTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 119 TTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCGTATGACTACTGGCAG 64 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510321217536