Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2764 342 8e-92 seq3381 239 7e-61 seq3087 91.5 2e-16 >seq2764 Length=1472 Score = 342 bits (378), Expect = 8e-92 Identities = 204/210 (97%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 207 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 150 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 149 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 90 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 89 CCCGGGCCTGTCGGCCAAGGTG-TGAACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 31 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTG 210 |||||||||||||||||||||||||||||| Sbjct 30 CCCAGAACATCTAAGGGCATCACAGACCTG 1 >seq3381 Length=461 Score = 239 bits (264), Expect = 7e-61 Identities = 182/211 (86%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| || |||||||||||| | Sbjct 253 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCATTTACTAGGAATT-C 310 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 |||||| |||| | |||||||| ||||||||| | ||||||| |||| |||||| Sbjct 311 CTCGTTCAAGATTGAAAATTGCAACAATCTATCCCTAGCACGATGCGCATTTACAAGATT 370 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||| |||||| || |||||||||| ||||||||||||||||||||| Sbjct 371 ACCCAGACCTATCGGTCAAGGTTTTAAACTCGTTGAACGCATCAGTGTAGCGCGCGTGCG 430 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTG 210 ||||||||||||||||||||||||||||||| Sbjct 431 GCCCAGAACATCTAAGGGCATCACAGACCTG 461 >seq3087 Length=32762 Score = 91.5 bits (100), Expect = 2e-16 Identities = 81/102 (79%), Gaps = 6/102 (6%) Strand=Plus/Plus Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192 || |||||| || ||| |||||| ||| |||||| ||||||||||||||||||||||| Sbjct 2957 GGTCAAGGTTTTAAACTTGTTGAACGCATGAGTGTAACGCGCGTGCGGCCCAGAACATCT 3016 Query 193 AAGGG------CATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||| || |||||| |||| |||||| ||||||| Sbjct 3017 AAGGGTATATATATTACAGACGTGTTGTTGCCTACAACTTCC 3058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751972717675