Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2990 233 4e-59 seq2412 221 2e-55 seq1105 93.3 8e-17 >seq2990 Length=597 Score = 233 bits (258), Expect = 4e-59 Identities = 203/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 191 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 250 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | || | ||||| |||||| | ||| || |||||||| Sbjct 251 GGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 309 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 310 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 369 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 370 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 428 Query 311 GTTAGGGG 318 ||| |||| Sbjct 429 GTTGGGGG 436 >seq2412 Length=612 Score = 221 bits (244), Expect = 2e-55 Identities = 201/249 (81%), Gaps = 6/249 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC---GAATACATTAGCAT 130 |||||| |||||||||||||||||| ||||||||| ||||||| |||||| | ||||| Sbjct 203 TTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTCATTGAATACTTCAGCAT 262 Query 131 GGAATAATAGAATAGGACGTGCG-GTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||||||||| ||| ||| | | | |||||||||||||||| | ||| ||||||| Sbjct 263 GGAATAATAAGATACGACCTTGGTGGTCTATTTTGTTGGTTTGCAC-ACCAGGGTAATGA 321 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||||||||| ||| |||||| | |||| | |||||||||||||||||||||| Sbjct 322 TTAATAGGGACAGTTGGGGGTATTCATATTTCAACGTCAGAGGTGAAATTCTTGGATCGT 381 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 | |||| | || |||||||| || ||||||||||||||||||||||| ||||||| Sbjct 382 TGAAAGATGAGCTTAGGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGAA 440 Query 310 AGTTAGGGG 318 ||||||||| Sbjct 441 AGTTAGGGG 449 >seq1105 Length=14647 Score = 93.3 bits (102), Expect = 8e-17 Identities = 91/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 198 GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 257 || ||| |||||| | |||| | |||||||||||||||||||||| | |||| Sbjct 1497 GACAGTTGGGGGTATTCATATTTCAACGTCAGAGGTGAAATTCTTGGATCGTTGAAAGAT 1556 Query 258 TAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 | || |||||||| || ||||||||||||||||||||||| ||||||||||| Sbjct 1557 GAGCTTAGGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 1611 Score = 80.6 bits (88), Expect = 5e-13 Identities = 73/91 (80%), Gaps = 1/91 (1%) Strand=Plus/Minus Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG 215 |||||||||||||||| | | | ||||||||||||||||| ||| |||||| | Sbjct 1857 TCTATTTTGTTGGTTTGCACTCCAGG-GTAATGATTAATAGGGACAGTTGGGGGTATTCA 1799 Query 216 TATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 |||| | |||||||||||||||||||||| Sbjct 1798 TATTTCAACGTCAGAGGTGAAATTCTTGGAT 1768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915165725760