Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq3174 113 6e-23 >seq3174 Length=494 Score = 113 bits (124), Expect = 6e-23 Identities = 170/242 (70%), Gaps = 21/242 (9%) Strand=Plus/Plus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 |||||| ||||||||||| ||||| || |||||||| ||||| | || ||| | ||| Sbjct 256 CTTCCAGCACCGGGCAGGTGTCAGACCCTATACATCATGTTACCAT-TTAGCAGAGTCCT 314 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGT 126 ||||||||| ||||||||||| ||||| || | || ||| || | Sbjct 315 GTGTTTTTATTAAACAGTCGCAACCCTCAAT--TTTGTGAC-------------ACCTTT 359 Query 127 CGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTT 186 ||| | | || || | ||||||||||||||| | | ||||||||||| |||||| Sbjct 360 TGTTAA-----AAAGGTACTCTTTCTCCCGAAGTTACAGAGTCATTTTGCCGAGTTCCTT 414 Query 187 AACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGG 246 | | ||||| | || ||||||| | || || | | ||||||||||||||| || Sbjct 415 CAAAATAGTTCTCTTATACACCTTAGTCTATTCGACTTATCTACCTGTGTCGGTTTAAGG 474 Query 247 TA 248 || Sbjct 475 TA 476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694374807385