Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq3290 176 7e-42 seq2764 93.3 7e-17 seq3381 91.5 2e-16 seq3087 87.8 3e-15 >seq3290 Length=239 Score = 176 bits (194), Expect = 7e-42 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 238 AGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 179 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 178 GCACCACCACCCATAGAATCAAGAAAGAGCTCTCAATCTGTC 137 >seq2764 Length=1472 Score = 93.3 bits (102), Expect = 7e-17 Identities = 59/64 (92%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 64 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 5 Query 62 CCTG 65 |||| Sbjct 4 CCTG 1 >seq3381 Length=461 Score = 91.5 bits (100), Expect = 2e-16 Identities = 50/50 (100%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTG 65 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 412 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTG 461 >seq3087 Length=32762 Score = 87.8 bits (96), Expect = 3e-15 Identities = 83/105 (79%), Gaps = 7/105 (7%) Strand=Plus/Plus Query 18 AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGG------CATCACAGACCTGTTATTG 71 |||||| |||||||||||||||||||||||||||| || |||||| |||| ||| Sbjct 2987 AGTGTAACGCGCGTGCGGCCCAGAACATCTAAGGGTATATATATTACAGACGTGTTGTTG 3046 Query 72 CCTCAAACTTCCATTG-GCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||| ||||||| ||| || | ||| ||||||||||||||| Sbjct 3047 CCTACAACTTCCTTTGTTATGATAAACAAAAGTCCCTCTAAGAAG 3091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796771092345