Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1107 154 3e-35 seq3422 147 4e-33 seq2830 105 1e-20 seq1371 91.5 3e-16 seq3428 89.7 9e-16 seq3166 87.8 3e-15 >seq1107 Length=568 Score = 154 bits (170), Expect = 3e-35 Identities = 97/105 (92%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 189 GGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTC 248 ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| | Sbjct 568 GGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCC 509 Query 249 GAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 || || |||||||||||||||||||| |||||| |||| |||||| Sbjct 508 GAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 464 >seq3422 Length=274 Score = 147 bits (162), Expect = 4e-33 Identities = 96/106 (91%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 189 GGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTC 248 ||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct 1 GGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCA 60 Query 249 GAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | | ||||||||||||||||||||| |||||| |||||||||||| Sbjct 61 AAAGAACTAAAGGATCGATAGGCCACGCTTTCACGGTTTGTATTCA 106 >seq2830 Length=1369 Score = 105 bits (116), Expect = 1e-20 Identities = 74/83 (89%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | || ||| ||||||||||||||||||||||||||||| Sbjct 1288 TACTAGGTTGAATTACTATTGCGACG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCA 1346 Query 61 TGACGGTCTAAACCCAGCTCACG 83 |||||||||||||||||||||| Sbjct 1347 CGACGGTCTAAACCCAGCTCACG 1369 >seq1371 Length=635 Score = 91.5 bits (100), Expect = 3e-16 Identities = 52/53 (98%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACG 83 |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 583 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACG 635 >seq3428 Length=11017 Score = 89.7 bits (98), Expect = 9e-16 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 216 ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 10966 AAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 11017 >seq3166 Length=5563 Score = 87.8 bits (96), Expect = 3e-15 Identities = 50/51 (98%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 177 CTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTG 227 ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CTATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTG 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854368002720