Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq3407 123 5e-26 seq546 109 1e-21 >seq3407 Length=1843 Score = 123 bits (136), Expect = 5e-26 Identities = 148/196 (76%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| ||| || |||| |||||||| |||||||| |||||||||| ||||| Sbjct 795 CCTTCTT-CACTCACTTGGTATTG-CTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCT 738 Query 77 CACTGCTGCCTCCCGT-AGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCC 135 ||||||||||| | | ||| ||| |||| ||||||| ||| |||| |||||| | | Sbjct 737 CACTGCTGCCTTTTTTAAAAAGTTTGGGCCGTTTCTCAGTCCCAATGTGGCTGATCGTTC 678 Query 136 TCTCAGACCAGTTACGGATCGTCGCCTTGGTGAG-CCATTACCTCACCAACTAGCTAATC 194 | ||| ||||| || ||| | | |||||| || | |||| |||||||| |||||| Sbjct 677 TTTCAAACCAGCTAAAGATTGCAGGCTTGGTAAGTCTATTAAACTACCAACTACCTAATC 618 Query 195 CGACCTAGGCTCATCT 210 || | ||||||| Sbjct 617 TTACGCAAACTCATCT 602 >seq546 Length=4094 Score = 109 bits (120), Expect = 1e-21 Identities = 119/154 (77%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| ||| || |||| |||||||| |||||||| |||||||||| ||||| Sbjct 1729 CCTTCTT-CACTCACTTGGTATTG-CTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCT 1786 Query 77 CACTGCTGCCTCCCGT-AGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCC 135 ||||||||||| | | ||| ||| |||| ||||||| ||| |||| |||||| | | Sbjct 1787 CACTGCTGCCTTTTTTAAAAAGTTTGGGCCGTTTCTCAGTCCCAATGTGGCTGATCGTTC 1846 Query 136 TCTCAGACCAGTTACGGATCGTCGCCTTGGTGAG 169 | ||| ||||| || ||| | | |||||| || Sbjct 1847 TTTCAAACCAGCTAAAGATTGCAGGCTTGGTAAG 1880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071959853600