Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq3186 78.8 2e-12 >seq3186 Length=1029 Score = 78.8 bits (86), Expect = 2e-12 Identities = 122/172 (71%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 226 CTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCT 285 |||||| | || |||||| || | || || ||| || || |||||| |||||| ||| Sbjct 760 CTTAAGTCTCGATACATTTTCAGTGCTAAAAAACTAGATCAATGAGCTTTTACGCTTTCT 701 Query 286 TTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTC 345 | ||||||| ||||||||||||| |||| || |||| | | || || |||| Sbjct 700 TAAAAGGATGACTGCTTCCAAGCCTACCTATTGATTGTATTTATTTTTTAACTTCTTTTC 641 Query 346 CCACTGAGTCACCACTTAGGGGCCTTAGCTGAT-GATCTGGGCTGTTTCCCT 396 |||| || | ||| | ||||| |||| ||||||||||||||||| Sbjct 640 TCACTTAGAATTTATTTAAAGACCTTA-ATGATCAATCTGGGCTGTTTCCCT 590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177555898880