Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq3407 93.3 4e-17 seq2088 75.2 9e-12 >seq3407 Length=1843 Score = 93.3 bits (102), Expect = 4e-17 Identities = 120/163 (74%), Gaps = 6/163 (4%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCG--- 58 |||||| ||| ||| |||||| |||| |||| ||||| |||| ||||| | Sbjct 1670 CGAGTTTCAGCCTATAATCCGAACTAAGATA-ACTTTTAAAGATTTGCTCCAATTTAAAA 1612 Query 59 -CGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGG 117 | | ||| | | |||| |||||||||| ||||||| ||||| || |||||||| Sbjct 1611 ACATTATTGCGTCTCATTGTAATTACCATTGTAGCACGTGTGTAGCCCAACTCATAAGGG 1552 Query 118 CCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCA 160 |||||| |||||||| ||||||||| |||||| | ||| ||| Sbjct 1551 CCATGAAGACTTGACCTCATCCCCA-CTTCCTTCAATTTATCA 1510 >seq2088 Length=4127 Score = 75.2 bits (82), Expect = 9e-12 Identities = 58/68 (85%), Gaps = 1/68 (1%) Strand=Plus/Plus Query 93 ACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCG 152 ||||||| ||||| || |||||||||||||| |||||||| ||||||||| |||||| | Sbjct 2054 ACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACCTCATCCCCA-CTTCCTTCA 2112 Query 153 GTTTGTCA 160 ||| ||| Sbjct 2113 ATTTATCA 2120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415984907650