Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq3407 109 1e-21 seq546 102 2e-19 >seq3407 Length=1843 Score = 109 bits (120), Expect = 1e-21 Identities = 133/179 (74%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 19 GCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCC 78 |||||||||| ||| || || |||| |||| |||| ||| |||||| ||| ||||| | Sbjct 796 GCCTTCTTCACTCACTTGGTATTGCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCTC 737 Query 79 ACTGCTGCCTCCCGT-AGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCT 137 |||||||||| | | ||| ||| |||| ||||||| ||| |||||||| || | || Sbjct 736 ACTGCTGCCTTTTTTAAAAAGTTTGGGCCGTTTCTCAGTCCCAATGTGGCTGATCGTTCT 677 Query 138 CTCAGACCAGCTAGGGATCGTCGCCTAGGT-GGGCCATTACCCCGCCAACTAGCTAATC 195 ||| |||||||| ||| | | || ||| | | |||| | ||||||| |||||| Sbjct 676 TTCAAACCAGCTAAAGATTGCAGGCTTGGTAAGTCTATTAAACTACCAACTACCTAATC 618 >seq546 Length=4094 Score = 102 bits (112), Expect = 2e-19 Identities = 103/133 (77%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 19 GCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCC 78 |||||||||| ||| || || |||| |||| |||| ||| |||||| ||| ||||| | Sbjct 1728 GCCTTCTTCACTCACTTGGTATTGCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCTC 1787 Query 79 ACTGCTGCCTCCCGT-AGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCT 137 |||||||||| | | ||| ||| |||| ||||||| ||| |||||||| || | || Sbjct 1788 ACTGCTGCCTTTTTTAAAAAGTTTGGGCCGTTTCTCAGTCCCAATGTGGCTGATCGTTCT 1847 Query 138 CTCAGACCAGCTA 150 ||| |||||||| Sbjct 1848 TTCAAACCAGCTA 1860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222354221120