Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq3407 136 1e-29 >seq3407 Length=1843 Score = 136 bits (150), Expect = 1e-29 Identities = 242/347 (70%), Gaps = 6/347 (2%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTAC--GTGCCAGCAGCCGCGGTAATACGTAGGGG 58 ||||| | || |||| | |||||| ||| |||||||||| |||||||||||| | Sbjct 840 TACTTAAAGAAGAAGTTCTGGCTAA-TACCCGTGCCAGCAGTCGCGGTAATACGGGAAGA 898 Query 59 GCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAG 118 || ||| |||| | ||| | | |||||||||||| |||||| |||| |||||| | Sbjct 899 GCGAGCATTATTCAAAATGATTAGGCGTAAAGGGTTTGTAGGTTGTTTTTTAAGTTGAAA 958 Query 119 GTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGG- 177 ||| || ||||||| || ||| ||||| | ||||||| | Sbjct 959 AGAAAATAATAAAGCTCAACTTTATCTCTTTTTTCAAAACTAAAAAACTAGAGTATACAT 1018 Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237 || || | | ||||| || || || | | |||| | |||| ||| ||||| | || Sbjct 1019 AGAGGATAATAGAATTTTTATTGGAGGGATAAAATCTATTGATAATAGAAGGAATATCAA 1078 Query 238 TGGCGAAGGCGGCTTGCTGGACTGTA-ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAA 296 ||||| || | |||| | || |||||||||||| ||||||| |||| ||| | Sbjct 1079 AAGCGAAAGCAATTATCTGGG-TATATACTGACACTGAGAAACGAAAGCTTGGGTAGCGA 1137 Query 297 ACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTA 343 || ||||||||||||| ||||||||| || ||||||||||| | ||| Sbjct 1138 ACGGGATTAGATACCCCGGTAGTCCATGCTGTAAACGATGAGTGCTA 1184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203154940160