Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2764 260 3e-67 seq3381 217 3e-54 seq3087 80.6 5e-13 >seq2764 Length=1472 Score = 260 bits (288), Expect = 3e-67 Identities = 184/208 (88%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 121 CAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAAC 180 |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 1 CAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAAC 60 Query 181 GAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGA 240 ||||||| ||||||||||| ||| | |||||||||| | ||| | ||||| |||||| Sbjct 61 GAGTTCA-CACCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGA 118 Query 241 TAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCA 300 |||| |||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||| Sbjct 119 TAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCT 178 Query 301 CGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||| ||||||||||||||||||| Sbjct 179 CGCGTTGACTACGTCCCTGCCCTTTGTA 206 >seq3381 Length=461 Score = 217 bits (240), Expect = 3e-54 Identities = 173/208 (83%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 121 CAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAAC 180 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 461 CAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCGTTCAAC 402 Query 181 GAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGA 240 ||||| | |||||| ||| |||||||||||||||||| || ||||||| |||| Sbjct 401 GAGTTTAAAACCTTGACCGATAGGTCTGGGTAATCTTGTAAATGCGCATCGTGCTAGGGA 342 Query 241 TAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCA 300 |||| |||||||| | |||| |||||||||| |||||||| || ||||||||| Sbjct 341 TAGATTGTTGCAATTTTCAATCTTGAACGAGGAATTCCTAGTAAATGCAAGTCATCAGCT 282 Query 301 CGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||||||||| Sbjct 281 TGCGTTGATTACGTCCCTGCCCTTTGTA 254 >seq3087 Length=32762 Score = 80.6 bits (88), Expect = 5e-13 Identities = 81/105 (77%), Gaps = 8/105 (8%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT--CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 ||||||||||||||| | | | || | | ||||||| |||||| |||| |||||| Sbjct 3091 CTTCTTAGAGGGACTTTTGTTTATCATAACAAAGGAAGTTGTAGGCAACAACACGTCTGT 3032 Query 130 GATG------CCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 || |||||||||||||||||||||||||||| |||||| Sbjct 3031 AATATATATACCCTTAGATGTTCTGGGCCGCACGCGCGTTACACT 2987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947164527360