Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05]
3,745 sequences; 32,921,669 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq1107 529 6e-148
seq3265 327 4e-87
seq3253 183 1e-43
seq3056 181 3e-43
seq528 178 4e-42
seq3422 141 3e-31
seq3089 75.2 4e-11
>seq1107
Length=568
Score = 529 bits (586), Expect = 6e-148
Identities = 382/434 (88%), Gaps = 8/434 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 430 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 371
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 370 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 311
Query 127 GGCCCGC-GAAG-GAC-CTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTTCA 182
| ||||| |||| || ||| | | || | || | || || | |||| ||||
Sbjct 310 GACCCGCCGAAGCGAGTCTTGGGTCTAAAAGAAGGG-GTTGTTACCCCGCCTCCGATTCA 252
Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242
|| ||||||||| |||| ||| ||||||||||||||||||||||| | |||||||
Sbjct 251 CGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGGA---GCTCCCA 195
Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 194 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 135
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 134 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTA 75
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 74 GACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 15
Query 423 CATTTGGCTACCTT 436
||||||||||||||
Sbjct 14 CATTTGGCTACCTT 1
>seq3265
Length=355
Score = 327 bits (362), Expect = 4e-87
Identities = 228/258 (88%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 179 TTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCT 238
||||| | ||||||| | || ||| |||||||||||||||| || | || | ||
Sbjct 100 TTCATGGTATAAGTAAGACGACATTAAAAGTAGTGGTATTTCACTGTCGGCAAAGC--CT 157
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298
||||||||| ||||||||| ||||||| |||||| ||| ||||||||||||||||||||
Sbjct 158 CCCACTTATACTACACCTCCTAAGTCATCTCACAACGTCAGACTAGAGTCAAGCTCAACA 217
Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358
|||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 218 GGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGAC 277
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 278 AGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAGTTAGATGAC 337
Query 419 GAGGCATTTGGCTACCTT 436
||||||||||||||||||
Sbjct 338 GAGGCATTTGGCTACCTT 355
>seq3253
Length=139766
Score = 183 bits (202), Expect = 1e-43
Identities = 113/121 (93%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 84353 TGACGAGGCATTTGGCTACCTTAAGAGAGACATAGTTACTCCCGTCGTTTACCCGCGCTT 84294
Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534
|||||||| |||||| ||||||||||| | ||||||||||||||||||||| |||||||
Sbjct 84293 GGTTGAATCTCTTCATTTTGACATTCAAATCACTGGGCAGAAATCACATTGTATCAACAT 84234
Query 535 C 535
|
Sbjct 84233 C 84233
>seq3056
Length=1788
Score = 181 bits (200), Expect = 3e-43
Identities = 103/105 (98%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 431 TACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCAC 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1788 TACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCAC 1729
Query 491 TTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1728 TTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 1684
>seq528
Length=1773
Score = 178 bits (196), Expect = 4e-42
Identities = 101/103 (98%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 431 TACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCAC 490
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1773 TACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATCTCTTCAC 1714
Query 491 TTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1713 TTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 1671
>seq3422
Length=274
Score = 141 bits (156), Expect = 3e-31
Identities = 99/113 (88%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| |||||| ||||||||||||||| |||| | |||||||||||||| ||| ||
Sbjct 139 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTCTG 198
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAAC 119
| |||||||||||||||||||||||||||||||||||||| ||||| || ||
Sbjct 199 TTCTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGATGTCTTCCAC 251
>seq3089
Length=33404
Score = 75.2 bits (82), Expect = 4e-11
Identities = 46/49 (94%), Gaps = 0/49 (0%)
Strand=Plus/Plus
Query 71 AACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAAC 119
||||||||||||||||||||||||||||||||||||| ||||| || ||
Sbjct 8477 AACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGATGTCTTCCAC 8525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635138761760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |