Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1107 529 6e-148 seq3265 327 4e-87 seq3253 183 1e-43 seq3056 181 3e-43 seq528 178 4e-42 seq3422 141 3e-31 seq3089 75.2 4e-11 >seq1107 Length=568 Score = 529 bits (586), Expect = 6e-148 Identities = 382/434 (88%), Gaps = 8/434 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 430 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 371 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 370 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 311 Query 127 GGCCCGC-GAAG-GAC-CTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTTCA 182 | ||||| |||| || ||| | | || | || | || || | |||| |||| Sbjct 310 GACCCGCCGAAGCGAGTCTTGGGTCTAAAAGAAGGG-GTTGTTACCCCGCCTCCGATTCA 252 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 || ||||||||| |||| ||| ||||||||||||||||||||||| | ||||||| Sbjct 251 CGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGGA---GCTCCCA 195 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 194 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 135 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 134 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTA 75 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 74 GACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 15 Query 423 CATTTGGCTACCTT 436 |||||||||||||| Sbjct 14 CATTTGGCTACCTT 1 >seq3265 Length=355 Score = 327 bits (362), Expect = 4e-87 Identities = 228/258 (88%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 179 TTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCT 238 ||||| | ||||||| | || ||| |||||||||||||||| || | || | || Sbjct 100 TTCATGGTATAAGTAAGACGACATTAAAAGTAGTGGTATTTCACTGTCGGCAAAGC--CT 157 Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 ||||||||| ||||||||| ||||||| |||||| ||| |||||||||||||||||||| Sbjct 158 CCCACTTATACTACACCTCCTAAGTCATCTCACAACGTCAGACTAGAGTCAAGCTCAACA 217 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 218 GGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGAC 277 Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 278 AGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAGTTAGATGAC 337 Query 419 GAGGCATTTGGCTACCTT 436 |||||||||||||||||| Sbjct 338 GAGGCATTTGGCTACCTT 355 >seq3253 Length=139766 Score = 183 bits (202), Expect = 1e-43 Identities = 113/121 (93%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 84353 TGACGAGGCATTTGGCTACCTTAAGAGAGACATAGTTACTCCCGTCGTTTACCCGCGCTT 84294 Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534 |||||||| |||||| ||||||||||| | ||||||||||||||||||||| ||||||| Sbjct 84293 GGTTGAATCTCTTCATTTTGACATTCAAATCACTGGGCAGAAATCACATTGTATCAACAT 84234 Query 535 C 535 | Sbjct 84233 C 84233 >seq3056 Length=1788 Score = 181 bits (200), Expect = 3e-43 Identities = 103/105 (98%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 431 TACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCAC 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1788 TACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCAC 1729 Query 491 TTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||| | |||| Sbjct 1728 TTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 1684 >seq528 Length=1773 Score = 178 bits (196), Expect = 4e-42 Identities = 101/103 (98%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 431 TACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCAC 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1773 TACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATCTCTTCAC 1714 Query 491 TTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1713 TTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 1671 >seq3422 Length=274 Score = 141 bits (156), Expect = 3e-31 Identities = 99/113 (88%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | |||||||||||||| ||| || Sbjct 139 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTCTG 198 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAAC 119 | |||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct 199 TTCTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGATGTCTTCCAC 251 >seq3089 Length=33404 Score = 75.2 bits (82), Expect = 4e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 71 AACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAAC 119 ||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct 8477 AACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGATGTCTTCCAC 8525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635138761760