Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq3407 78.8 2e-12 seq546 75.2 2e-11 >seq3407 Length=1843 Score = 78.8 bits (86), Expect = 2e-12 Identities = 151/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCAC--GCTACTTGGCTGGTTCAGACT 139 ||||| ||||||| | | | ||||| || |||| | || | ||||| ||| || Sbjct 818 AAAGAGTTTTACAACCTATTTAGCCTTCTTCACTCACTTGGTATT--GCTGGATCAAGCT 761 Query 140 CTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGT-AGGAGTTTGGACCGTGTCTC 198 ||| ||||| |||| ||||||||||||||||| | | ||||||| |||| |||| Sbjct 760 TTCGCTCATTGTCCAAAATTCCTCACTGCTGCCTTTTTTAAAAAGTTTGGGCCGTTTCTC 701 Query 199 AGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGT-GGGCC 257 ||| ||||||||| || | | || ||| | | ||| || | ||||| ||| | | Sbjct 700 AGTCCCAATGTGGCTGATCGTTCTTTCAAACCAGCTAAAGATTGCAGGCTTGGTAAGTCT 641 Query 258 GTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 ||| | || |||||||||| ||||| | |||| Sbjct 640 ATTAAACTACCAACTACCTAATCTTACGCAAACTCATC 603 >seq546 Length=4094 Score = 75.2 bits (82), Expect = 2e-11 Identities = 123/174 (71%), Gaps = 5/174 (3%) Strand=Plus/Plus Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCAC--GCTACTTGGCTGGTTCAGACT 139 ||||| ||||||| | | | ||||| || |||| | || | ||||| ||| || Sbjct 1706 AAAGAGTTTTACAACCTATTTAGCCTTCTTCACTCACTTGGTATT--GCTGGATCAAGCT 1763 Query 140 CTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGT-AGGAGTTTGGACCGTGTCTC 198 ||| ||||| |||| ||||||||||||||||| | | ||||||| |||| |||| Sbjct 1764 TTCGCTCATTGTCCAAAATTCCTCACTGCTGCCTTTTTTAAAAAGTTTGGGCCGTTTCTC 1823 Query 199 AGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGT 252 ||| ||||||||| || | | || ||| | | ||| || | ||||| ||| Sbjct 1824 AGTCCCAATGTGGCTGATCGTTCTTTCAAACCAGCTAAAGATTGCAGGCTTGGT 1877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068759973440