Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05]
3,745 sequences; 32,921,669 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq2423 143 2e-29
seq3629 120 2e-22
>seq2423
Length=50609
Score = 143 bits (158), Expect = 2e-29
Identities = 962/1513 (64%), Gaps = 63/1513 (4%)
Strand=Plus/Minus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
|||||| ||||| ||||| |||| || | || | ||||||||||| || ||
Sbjct 21433 ATCGACTGTGAATTGGATTGCATCTGCTCTTGGACGTGTTCGGAGATAGTACATTCCTGT 21374
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCT 65195
|||||| || ||| || |||||||||||||| | | | ||| | | | |||| |
Sbjct 21373 CTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGAAG-TGAGTTTACTGACAGTCGGGT 21315
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
|||| | || ||||| | || ||||||||| ||||| || ||||| |||||||
Sbjct 21314 CGGCAATGTGAATATTTAGTGATTGACTCTGACAAATGTACGCTCCTCGATCGGCAGCCA 21255
Query 65256 TGTCAATGATACGACGTCCCGAT-ATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314
|||| | || || | | | || ||||| || || |||||| || | |
Sbjct 21254 TGTCCAAAAT-CGCCTTTTGCTTGATTTCCCAAACTGTTTTGTACTTTTCTTTCACATGA 21196
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGA-CGTGCAATAATGCGATTACGCAT 65373
||||| || | || | || || ||||| ||| || | || || |||| || |
Sbjct 21195 GAAGGAATTTCAGCGATATTTTGTACGGAACCGCGATCGCG-AAGGATTTGATTCCGAA- 21138
Query 65374 CGACTC-TGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGAC-- 65430
|| || || ||||||| || || ||||| | || ||| | || ||| ||||
Sbjct 21137 CGTCTGATGTCCACAAATTCATCTCAATAAGCTCTT---CCATGAGATATTTGTTGACAA 21081
Query 65431 TTGGAACT-CGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489
||| || | | || | || || || || | |||||||| |||| || || | |
Sbjct 21080 TTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATGTTGGAAGTGAACGGCTCGATAG 21021
Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATG 65549
| || ||||| |||||||| || || || || |||||||| ||||||| || ||| |
Sbjct 21020 ACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTTGGCATCGGAGCGAGCAGCAAAG 20961
Query 65550 AGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCAC--ATCGG 65607
||||||| | ||||| | | | | | ||| | | ||| | ||| | |||
Sbjct 20960 AGTTTCGGATTCCGTGAGTAGCTACTTGCTCTTTCAACTGCTTCCAATCCCATCGACCGG 20901
Query 65608 TTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGA 65667
|||| || || || |||||||||| ||| | | | || ||| | |||||
Sbjct 20900 A--ATCGG-GA-ATG-ACCTGCCACATATCAAATTGAAAGATACCTCGACTAACTGGTGA 20846
Query 65668 ACCGAGGAAA-CTATCGTACACTCCCTCCTCCT-TGGCAAGT---TGACAGCTGGTCTCG 65722
|| || | | || |||||| ||| ||| || ||| | || |||| ||
Sbjct 20845 TCC-AGCATAGCTCTCGTACGGTCCGAGTTCCCGTGCCAATTCCATGGAAGCT----TCC 20791
Query 65723 AGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTC 65782
| || || ||||| || || || ||||| | || || || || || | | |||
Sbjct 20790 ATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGCGAGCAGCTTTGCTT 20731
Query 65783 TCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATG 65842
|| | || | || |||||| | ||| || ||||| ||||||||||| || || || ||
Sbjct 20730 TCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAACGCCGATTCCAATC 20671
Query 65843 GGACGATGACGCAAATTGGA-ACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGAT 65901
|| ||||| ||| |||| || | | || ||||| | || || ||||||| ||| ||
Sbjct 20670 GGTCGATGTCGCTGATTGCTCACTTGT-GCTTCAGGAATCGGATAATAATTGAGATCAAT 20612
Query 65902 AATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAA 65960
|| || | ||| || || | | ||| ||| |||| | | || | ||
Sbjct 20611 GATTTTGTTGAGATTTTTCGTAACGATTTTTGTGATTTCGTAT-AATTTTGCAAACTGAA 20553
Query 65961 AATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGA 66020
| | ||| | || || ||||| || | | || | || || |
Sbjct 20552 ATTCTTT-----------------CTGATAC-ACAAATTTTGACAATGCGATGGAAGCCA 20511
Query 66021 GGTTGCAGACAGCTATCTCGTCAGGAG-CGGTATACTCGACAATTTCGGTGCACAGATTA 66079
||||| || || | || | |||| | | ||||||| ||||| ||| |||||
Sbjct 20510 AATTGCATACTGCCACTTCTTT-GGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTG 20452
Query 66080 CTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139
|| | || ||||| || | |||||| ||||| || ||||| || || || |||||
Sbjct 20451 CTTGATCGAATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAA 20392
Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGC-G 66198
| ||| ||||| || |||||||||| || || | ||||| ||| | | || |
Sbjct 20391 AGCATATACGGCGTTCCGGTCTCAATCTGACTATCCAAAATGGCAAACCACA-ATTGCTG 20333
Query 66199 TGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGA 66257
|| || || || | | | | | |||| | ||||| | ||| || | || |
Sbjct 20332 GGCTTTGACAGT-CTTTCGGGCAATGTTTTGAGACTCGTACTTTTCATATAACGCATCAA 20274
Query 66258 AG--GATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCA 66315
| | ||| ||||| || | || | |||| || || ||||| | | |||
Sbjct 20273 ATTCGCTTC--CCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCA 20216
Query 66316 ATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAG 66375
|| | | ||| ||||| |||||| ||||| || ||||| || || || || |
Sbjct 20215 TTCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAATAA 20156
Query 66376 ATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGAT 66435
||| |||||||| || ||| | || ||||| || || | || || |||||||||||
Sbjct 20155 ATCTCGTGCTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGAT 20096
Query 66436 GTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTG 66495
|| |||||||| || || || || || || || || || | || || || ||||||||
Sbjct 20095 ATCCGCATGCCAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCACCTTG 20036
Query 66496 GTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTT 66555
|| ||||| ||||| | ||||| || || | ||| || || | || || || |
Sbjct 20035 ATCAACGTATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACT 19976
Query 66556 GCCATTGGTGCCG 66568
||||| || |||
Sbjct 19975 TCCATTCGTCCCG 19963
>seq3629
Length=149247
Score = 120 bits (132), Expect = 2e-22
Identities = 371/565 (66%), Gaps = 22/565 (4%)
Strand=Plus/Minus
Query 61084 GATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGAT 61143
|| |||||| |||||| || || || || || ||| ||||| | || || |||||
Sbjct 31494 GAGATTTGGGACATGTATAAGAAAGCAGAGGCAAGCTTTTGGACCGCAGAAGAAATCGAT 31435
Query 61144 TTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203
||| | ||||||||||||||| | ||||| | ||| ||| || || |||
Sbjct 31434 TTGGTGCATGACATGAATGACTGGCTTAATATATCGGACAATGAGAGACACTTTATCAAA 31375
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTT----ATTGGA 61259
|| |||||||| |||||||| || || || || || ||||| ||| | || ||
Sbjct 31374 CACGTGTTGGCCTTCTTTGCAGCCAGTGATGGGATTGTTAATGAAAATCTCGCCAT--GA 31317
Query 61260 ACGTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTG 61318
| |||| |||| ||||| ||| | |||| || || || || || || ||||| ||||
Sbjct 31316 A--TTTC-AGCAGTGAGGTTCAAATCCCGGAAGCTCGATGCTTTTATGGATTCCAAATTG 31260
Query 61319 CCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
| || || ||| | |||||||| |||| | | || ||||| ||||||| || |
Sbjct 31259 CAATAGAAAATATACACTCGGAAGTGTATTCGTTATTGATTGATACATACATCAAAGATC 31200
Query 61379 GGGCGGAACGTGAACGATTGTTCAAT--GCCATCGAGACGATACCGGCGGTGAAGCGGAA 61436
| ||| | | ||| | | || || || || || || ||| || | ||
Sbjct 31199 CAACCGAAAAACAGC-ATT-TACTATGCGCGATTGAAACAATCCCGTGCGTTACCAATAA 31142
Query 61437 AGCGGATTGGGCCTTCAATTG----GATCACCAGTACAACGGCTACATTTGGTGAACGAT 61492
||| | ||||| || || || |||| |||| || | |||| ||| ||
Sbjct 31141 AGCACAATGGGCGTTGAAATGGTGCGATCCAAAGTA----TGCCTCGTTTGCAGAAAGAG 31086
Query 61493 TGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTT 61552
|| | || ||||||| ||||| || | |||||| ||||| || | | || ||||
Sbjct 31085 TGGTAGCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGCTCTATATTTT 31026
Query 61553 GGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCG 61612
|| |||||||||| ||| | ||||| || || ||| |||||| | || || |
Sbjct 31025 GGCTGAAGAAACGAGGATTGATGCCTGGACTTTGCTTTTCAAATGAGCTCATCAGTCGTG 30966
Query 61613 ACGAGGGCATGCATTGTGATTTTGC 61637
| || || | |||||||| |||||
Sbjct 30965 ATGAAGGACTACATTGTGACTTTGC 30941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397549854126800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |