Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq5458 233 3e-59 seq2509 98.7 1e-18 seq158 91.5 2e-16 >seq5458 Length=205 Score = 233 bits (258), Expect = 3e-59 Identities = 180/207 (87%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 3 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 60 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | |||||| Sbjct 61 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 120 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||| ||||| | | ||||| || | | ||||||||||||||||||| Sbjct 121 ACCCAGACCTTTCGGACAAGGA-AGA-ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 178 Query 180 GCCCAGAACATCTAAGGGCATCACAGA 206 ||||||||||||||||||||||||||| Sbjct 179 GCCCAGAACATCTAAGGGCATCACAGA 205 >seq2509 Length=294 Score = 98.7 bits (108), Expect = 1e-18 Identities = 54/54 (100%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 175 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 294 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 241 >seq158 Length=60282 Score = 91.5 bits (100), Expect = 2e-16 Identities = 81/102 (79%), Gaps = 6/102 (6%) Strand=Plus/Plus Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192 || |||||| || ||| |||||| ||| |||||| ||||||||||||||||||||||| Sbjct 2951 GGTCAAGGTTTTAAACTTGTTGAACGCATGAGTGTAACGCGCGTGCGGCCCAGAACATCT 3010 Query 193 AAGGG------CATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||| || |||||| |||| |||||| ||||||| Sbjct 3011 AAGGGTATATATATTACAGACGTGTTGTTGCCTACAACTTCC 3052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751947118185