Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq7121 167 1e-39 seq3051 158 7e-37 seq312 102 5e-20 >seq7121 Length=219 Score = 167 bits (184), Expect = 1e-39 Identities = 107/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||| || |||||||| | ||||||||| || Sbjct 48 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCTGAACGAGTCAAGAAAATAACATCGTCC 107 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 108 AATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 164 >seq3051 Length=360 Score = 158 bits (174), Expect = 7e-37 Identities = 106/117 (91%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| || ||||| | |||||| || || Sbjct 49 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAG-TAATAACACCGTCC 107 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 108 GATCCCTAGTCGGCATCGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 164 >seq312 Length=219 Score = 102 bits (112), Expect = 5e-20 Identities = 96/120 (80%), Gaps = 3/120 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAA--AATGATAACATCGC 58 ||||||||||||||||||||||| || ||||| || |||| || | ||| | Sbjct 48 GAACCCAAAGACTTTGATTTCTCATACGGTGCTGACAAGGTCATTTAAAGTAAACGACTG 107 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGA-CGGTATCTGATCGTCTTCGA 117 || ||||| ||||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 108 CCAATCCCGAGTCGGCATAGTTTATGGTTAAGACTACGATTGGTATCTAATCATCTTCGA 167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278381054010