Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05]
7,259 sequences; 32,214,895 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq7121 167 1e-39
seq3051 158 7e-37
seq312 102 5e-20
>seq7121
Length=219
Score = 167 bits (184), Expect = 1e-39
Identities = 107/117 (91%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||| || |||||||| | ||||||||| ||
Sbjct 48 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCTGAACGAGTCAAGAAAATAACATCGTCC 107
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 108 AATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 164
>seq3051
Length=360
Score = 158 bits (174), Expect = 7e-37
Identities = 106/117 (91%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| || ||||| | |||||| || ||
Sbjct 49 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAG-TAATAACACCGTCC 107
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 108 GATCCCTAGTCGGCATCGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 164
>seq312
Length=219
Score = 102 bits (112), Expect = 5e-20
Identities = 96/120 (80%), Gaps = 3/120 (3%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAA--AATGATAACATCGC 58
||||||||||||||||||||||| || ||||| || |||| || | ||| |
Sbjct 48 GAACCCAAAGACTTTGATTTCTCATACGGTGCTGACAAGGTCATTTAAAGTAAACGACTG 107
Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGA-CGGTATCTGATCGTCTTCGA 117
|| ||||| ||||||||||||||| |||||||||||||| ||||||| ||| |||||||
Sbjct 108 CCAATCCCGAGTCGGCATAGTTTATGGTTAAGACTACGATTGGTATCTAATCATCTTCGA 167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278381054010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |