Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq3051 315 1e-83 seq3050 237 3e-60 seq4348 196 9e-48 seq76 156 8e-36 seq2814 84.2 4e-14 seq312 73.4 7e-11 >seq3051 Length=360 Score = 315 bits (348), Expect = 1e-83 Identities = 188/196 (96%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 123 ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC 182 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 360 ATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC 301 Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct 300 GTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTT 241 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 240 GGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG- 182 Query 303 GAACGAAAGTTAGGGG 318 |||||||||||||||| Sbjct 181 GAACGAAAGTTAGGGG 166 >seq3050 Length=272 Score = 237 bits (262), Expect = 3e-60 Identities = 151/164 (92%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||||||||||| |||| ||| || |||||||||||||||| ||| |||||| Sbjct 109 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCCCATGCCCTTCACTGGGCGTGGCGGGGA 168 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||||||||||||||||||| || | |||||||| ||||||||||||| Sbjct 169 AACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACAT 228 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG 168 ||||||||||||||| |||||||||||||||||||||||||||| Sbjct 229 TAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGG 272 >seq4348 Length=251 Score = 196 bits (216), Expect = 9e-48 Identities = 142/163 (87%), Gaps = 1/163 (1%) Strand=Plus/Plus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| |||||| ||| ||| ||| || || ||||| |||| | |||||||| || | Sbjct 89 GTCAGGCCGGATCTTCCCTCTTGGTGAGCCAGCATGTCCTTTATTGGGTGTGTTGGTAAA 148 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||| Sbjct 149 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATATATT 208 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG 168 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 209 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGG 251 >seq76 Length=337 Score = 156 bits (172), Expect = 8e-36 Identities = 141/174 (81%), Gaps = 5/174 (3%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC---GAATACATTAGCAT 130 |||||| |||||||||||||||||| ||||||||| ||||||| |||||| | ||||| Sbjct 173 TTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTCATTGAATACTTCAGCAT 114 Query 131 GGAATAATAGAATAGGACGTGCG-GTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||||||||| ||| ||| | | | |||||||||||||||| | ||| ||||||| Sbjct 113 GGAATAATAAGATACGACCTTGGTGGTCTATTTTGTTGGTTTGCAC-ACCAGGGTAATGA 55 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||| ||| |||||| | |||| | ||||||||||||||||||| Sbjct 54 TTAATAGGGACAGTTGGGGGTATTCATATTTCAACGTCAGAGGTGAAATTCTTG 1 >seq2814 Length=516 Score = 84.2 bits (92), Expect = 4e-14 Identities = 74/91 (81%), Gaps = 1/91 (1%) Strand=Plus/Minus Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG 215 |||||||||||||||| | ||| ||||||||||||||||| ||| |||||| | Sbjct 243 TCTATTTTGTTGGTTTGCAC-ACCAGGGTAATGATTAATAGGGACAGTTGGGGGTATTCA 185 Query 216 TATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 |||| | |||||||||||||||||||||| Sbjct 184 TATTTCAACGTCAGAGGTGAAATTCTTGGAT 154 >seq312 Length=219 Score = 73.4 bits (80), Expect = 7e-11 Identities = 48/52 (92%), Gaps = 1/52 (2%) Strand=Plus/Minus Query 267 CGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||| || ||||||||||||||||||||||| |||||||||||||||| Sbjct 219 CGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTAGGGG 169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915133565632