Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2509 273 3e-71 seq5458 104 4e-20 seq158 87.8 3e-15 >seq2509 Length=294 Score = 273 bits (302), Expect = 3e-71 Identities = 201/230 (87%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 30 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGC 89 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 294 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCCTCGGC 235 Query 90 TGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATG-GGGCTATTTA 148 | | | || | |||||||||||||||||||| | ||| || | || |||||| ||| Sbjct 234 TTGCA-CCGAGAGTCCCTCTAAGAAGCCAGCGTACTGCCAAAG-CAATACGGGCTAGTTA 177 Query 149 GCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGA 208 | |||||||||||||||||||||||| |||||| | | ||| |||| |||| |||||||| Sbjct 176 GTAGGTTAAGGTCTCGTTCGTTATCGTAATTAAACTGCCAAGTCACCCCACGAACTAAGA 117 Query 209 ACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||| | ||||||||||||||| |||||||||| Sbjct 116 ACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAATCTGTC 67 >seq5458 Length=205 Score = 104 bits (114), Expect = 4e-20 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 146 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 205 >seq158 Length=60282 Score = 87.8 bits (96), Expect = 3e-15 Identities = 83/105 (79%), Gaps = 7/105 (7%) Strand=Plus/Plus Query 18 AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGG------CATCACAGACCTGTTATTG 71 |||||| |||||||||||||||||||||||||||| || |||||| |||| ||| Sbjct 2981 AGTGTAACGCGCGTGCGGCCCAGAACATCTAAGGGTATATATATTACAGACGTGTTGTTG 3040 Query 72 CCTCAAACTTCCATTG-GCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||| ||||||| ||| || | ||| ||||||||||||||| Sbjct 3041 CCTACAACTTCCTTTGTTATGATAAACAAAAGTCCCTCTAAGAAG 3085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796743967779