Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2828 383 3e-104 seq537 158 2e-36 seq3527 82.4 1e-13 seq2623 78.8 2e-12 seq121 78.8 2e-12 >seq2828 Length=258 Score = 383 bits (424), Expect = 3e-104 Identities = 223/230 (97%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 66 GTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCT 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 258 GTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCT 199 Query 126 GCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACG 185 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 198 GCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACG 139 Query 186 CTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAAT 245 |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 138 CTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCTTCACAC 79 Query 246 TTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 78 GTCGAAGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 29 >seq537 Length=253 Score = 158 bits (174), Expect = 2e-36 Identities = 102/112 (91%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 183 ACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCA 242 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | Sbjct 1 ACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTAA 60 Query 243 AATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 |||| | | ||||||||||||||||||||| |||||| |||||||||||| Sbjct 61 AATTCAAAAGAACTAAAGGATCGATAGGCCACGCTTTCACGGTTTGTATTCA 112 >seq3527 Length=5559 Score = 82.4 bits (90), Expect = 1e-13 Identities = 45/45 (100%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 183 ACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTG 227 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTG 45 >seq2623 Length=10693 Score = 78.8 bits (86), Expect = 2e-12 Identities = 45/46 (98%), Gaps = 0/46 (0%) Strand=Plus/Plus Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 10648 AAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCC 10693 >seq121 Length=619 Score = 78.8 bits (86), Expect = 2e-12 Identities = 45/46 (98%), Gaps = 0/46 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCA 76 |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 574 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCA 619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854337979104