Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq4348 178 2e-42 seq3050 141 1e-31 seq76 80.6 3e-13 seq3051 78.8 1e-12 >seq4348 Length=251 Score = 178 bits (196), Expect = 2e-42 Identities = 152/185 (82%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAA 72 |||||||||||| ||||||||||||| ||||||||||||||||| ||||||||| || Sbjct 251 CCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATATATTCGGGCATAG 192 Query 73 GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACA-CCAA 131 |||||||||||||||||||||||| |||| ||||||||||||||| | |||| |||| Sbjct 191 GCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTTACCAACACACCCAA 132 Query 132 TGAAGG-CATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGTGAGGC 190 | |||| ||| | |||||||||||||| | | || |||||| |||||| || | Sbjct 131 TAAAGGACATGCTGGCTCACCAAGAGGGAAGATCCGGCCTGACAGTACACGCCGTAAGAC 72 Query 191 GGACC 195 ||||| Sbjct 71 GGACC 67 >seq3050 Length=272 Score = 141 bits (156), Expect = 1e-31 Identities = 144/185 (78%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAA 72 |||||||||||| ||||||||||||| |||||||||||||||||||||||| || || Sbjct 272 CCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGTATTCGAGCATAG 213 Query 73 GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCAC-ACCAA 131 |||||| | || |||||||||||| |||| |||||||||||| |||| | ||| ||| Sbjct 212 GCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAAAGTCCTGTTTCCCCGCCACGCCCAG 153 Query 132 TGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGTGAGGC 190 |||| ||||| || ||| || | ||| | || |||| | ||| ||||||| Sbjct 152 TGAAGGGCATGGGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTGCACGCGGTGAGGC 93 Query 191 GGACC 195 ||||| Sbjct 92 GGACC 88 >seq76 Length=337 Score = 80.6 bits (88), Expect = 3e-13 Identities = 80/102 (78%), Gaps = 4/102 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGG-ACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC---G 65 ||||||||||||||| || | ||| ||| |||||||||||||| | |||||| | Sbjct 72 AAACCAACAAAATAGACCACCAAGGTCGTATCTTATTATTCCATGCTGAAGTATTCAATG 131 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 || | ||||||||| |||||||||||||| ||| ||||| Sbjct 132 AGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 173 >seq3051 Length=360 Score = 78.8 bits (86), Expect = 1e-12 Identities = 49/53 (92%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT 58 ||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 308 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAAT 360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595158144606