Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq9 129 1e-27 >seq9 Length=975 Score = 129 bits (142), Expect = 1e-27 Identities = 221/317 (70%), Gaps = 3/317 (1%) Strand=Plus/Plus Query 29 CGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAA 88 ||||||||||| |||||||||||| | || ||| |||| | ||| | | ||||||| Sbjct 18 CGTGCCAGCAGTCGCGGTAATACGGGAAGAGCGAGCATTATTCAAAATGATTAGGCGTAA 77 Query 89 AGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGGGACTG 148 ||||| |||||| |||| |||||| | ||| || ||||||| || Sbjct 78 AGGGTTTGTAGGTTGTTTTTTAAGTTGAAAAGAAAATAATAAAGCTCAACTTTATCTCTT 137 Query 149 CTTTTGAAACTGCAGGGCTAGAGTGCAGG-AGGGGCAAGTGGAATTCCTAGTGTAGCGGT 207 ||| ||||| | ||||||| | || || | | ||||| || || || | | Sbjct 138 TTTTCAAAACTAAAAAACTAGAGTATACATAGAGGATAATAGAATTTTTATTGGAGGGAT 197 Query 208 GAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA-ACT 266 |||| | |||| ||| ||||| | || ||||| || | |||| | || ||| Sbjct 198 AAAATCTATTGATAATAGAAGGAATATCAAAAGCGAAAGCAATTATCTGGG-TATATACT 256 Query 267 GACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCC 326 ||||||||| ||||||| |||| ||| ||| ||||||||||||| ||||||||| || Sbjct 257 GACACTGAGAAACGAAAGCTTGGGTAGCGAACGGGATTAGATACCCCGGTAGTCCATGCT 316 Query 327 GTAAACGATGAATACTA 343 ||||||||||| | ||| Sbjct 317 GTAAACGATGAGTGCTA 333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203112659712