Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5458 307 2e-81 seq2509 176 9e-42 seq158 80.6 5e-13 >seq5458 Length=205 Score = 307 bits (340), Expect = 2e-81 Identities = 191/204 (94%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 205 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGT 146 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || || |||| ||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 145 TCTTC--CTTGTCCGAAAGGTCTGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGA 88 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||| Sbjct 87 GCATTGCAATTATTGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCG 28 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 27 TTGATTACGTCCCTGCCCTTTGTA 4 >seq2509 Length=294 Score = 176 bits (194), Expect = 9e-42 Identities = 121/137 (88%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||| ||||| | |||||||| | ||| |||||||||| Sbjct 158 GAACGAGACCTTAACCTACTAACTAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 217 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 ||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 218 AGGGACTCTCGGTGCAAGCCGAGGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 277 Query 140 GATGTTCTGGGCCGCAC 156 ||||||||||||||||| Sbjct 278 GATGTTCTGGGCCGCAC 294 >seq158 Length=60282 Score = 80.6 bits (88), Expect = 5e-13 Identities = 81/105 (77%), Gaps = 8/105 (8%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT--CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 ||||||||||||||| | | | || | | ||||||| |||||| |||| |||||| Sbjct 3085 CTTCTTAGAGGGACTTTTGTTTATCATAACAAAGGAAGTTGTAGGCAACAACACGTCTGT 3026 Query 130 GATG------CCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 || |||||||||||||||||||||||||||| |||||| Sbjct 3025 AATATATATACCCTTAGATGTTCTGGGCCGCACGCGCGTTACACT 2981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947131242752