Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq534 125 6e-24 seq1573 116 3e-21 >seq534 Length=9540 Score = 125 bits (138), Expect = 6e-24 Identities = 958/1513 (63%), Gaps = 63/1513 (4%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||| ||||| |||| || | || | ||||||||||| || || Sbjct 3934 ATCGACTGTGAATTGGATTGCATCTGCTCTTGGACGTGTTCGGAGATAGTACATTCCTGT 3993 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCT 65195 |||||| || ||| || |||||||||||||| | | | ||| | | | |||| | Sbjct 3994 CTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGAAG-TGAGTTTACTGACAGTCGGGT 4052 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 |||| | || ||||| | || ||||||||| ||||| || ||||| ||||||| Sbjct 4053 CGGCAATGTGAATATTTAGTGATTGACTCTGACAAATGTACGCTCCTCGATCGGCAGCCA 4112 Query 65256 TGTCAATGATACGACGTCCCGAT-ATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314 |||| | || || | | | || ||||| || || |||||| || | | Sbjct 4113 TGTCCAAAAT-CGCCTTTTGCTTGATTTCCCAAACTGTTTTGTACTTTTCTTTCACATGA 4171 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGA-CGTGCAATAATGCGATTACGCAT 65373 ||||| || | || | || || ||||| ||| || | || || |||| || | Sbjct 4172 GGCGGAATTTCAGCGATATTTTGTACGGAACCGCGATCGCG-AAGGATTTGATTCCGAA- 4229 Query 65374 CGACTC-TGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGAC-- 65430 || || || ||||||| || || ||||| | || ||| | || ||| |||| Sbjct 4230 CGTCTGATGTCCACAAATTCATCTCAATAAGCTCTT---CCATGAGATATTTGTTGACAA 4286 Query 65431 TTGGAACT-CGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489 ||| || | | || | || || || || | |||||||| |||| || || | | Sbjct 4287 TTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATGTTGGAAGTGAACGGCTCGATAG 4346 Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATG 65549 | || ||||| |||||||| || || || || |||||||| ||||||| || ||| | Sbjct 4347 ACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTTGGCATCGGAGCGAGCAGCAAAG 4406 Query 65550 AGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCAC--ATCGG 65607 ||||||| | ||||| | | | | | ||| | | ||| | ||| | ||| Sbjct 4407 AGTTTCGGATTCCGTGAGTAGCTACTTGCTCTTTCAACTGCTTCCAATCCCATCGACCGG 4466 Query 65608 TTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGA 65667 |||| || || || |||||||||| ||| | | | || ||| | ||||| Sbjct 4467 A--ATCGG-GA-ATG-ACCTGCCACATATCAAATTGAAAGATACCTCGACTAACTGGTGA 4521 Query 65668 ACCGAGGAAA-CTATCGTACACTCCCTCCTCCT-TGGCAAGT---TGACAGCTGGTCTCG 65722 || || | | || |||||| ||| ||| || ||| | || |||| || Sbjct 4522 TCC-AGCATAGCTCTCGTACGGTCCGAGTTCCCGTGCCAATTCCATGGAAGCT----TCC 4576 Query 65723 AGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTC 65782 | || || ||||| || || || ||||| | || || || || || | | ||| Sbjct 4577 ATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGCGAGCAGCTTTGCTT 4636 Query 65783 TCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATG 65842 || | || | || |||||| | ||| || ||||| ||||||||||| || || || || Sbjct 4637 TCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAACGCCGATTCCAATC 4696 Query 65843 GGACGATGACGCAAATTGGA-ACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGAT 65901 || ||||| ||| |||| || | | || ||||| | || || ||||||| ||| || Sbjct 4697 GGTCGATGTCGCTGATTGCTCACTTGT-GCTTCAGGAATCGGATAATAATTGAGATCAAT 4755 Query 65902 AATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAA 65960 || || | ||| || || | | ||| ||| |||| | | || | || Sbjct 4756 GATTTTGTTGAGATTTTTCGTAACGATTTTTGTGATTTCGTAT-AATTTTGCAAATTGAA 4814 Query 65961 AATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGA 66020 | | ||| | || || ||||| || | | || | || || | Sbjct 4815 ATTCTTT-----------------CTGATAC-ACAAATTTTGACAATGCGATGGAAGCCA 4856 Query 66021 GGTTGCAGACAGCTATCTCGTCAGGAG-CGGTATACTCGACAATTTCGGTGCACAGATTA 66079 ||||| || || | || | |||| | | ||||||| ||||| ||| ||||| Sbjct 4857 AATTGCATACTGCCACTTCTTT-GGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTG 4915 Query 66080 CTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139 || | || ||||| || | |||||| ||||| || ||||| || || || ||||| Sbjct 4916 CTTGATCGAATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAA 4975 Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGC-G 66198 | ||| ||||| || |||||||||| || || | ||||| ||| | | || | Sbjct 4976 AGCATATACGGCGTTCCGGTCTCAATCTGACTATCCAAAATGGCAAACCACA-ATTGCTG 5034 Query 66199 TGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGA 66257 || || || || | | | | | |||| | ||||| | || || | || | Sbjct 5035 GGCTTTGACAGT-CTTTCGGGCAATGTTTTGAGACTCGTACTTTTTATATAACGCATCAA 5093 Query 66258 AG--GATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCA 66315 | | ||| ||||| || | || | |||| || || ||||| | | ||| Sbjct 5094 ATTCGCTTC--CCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCA 5151 Query 66316 ATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAG 66375 || | | ||| ||||| |||||| ||||| || ||||| || || || || | Sbjct 5152 TTCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAACAA 5211 Query 66376 ATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGAT 66435 ||| || ||||| || ||| | || ||||| || || | || || ||||||||||| Sbjct 5212 ATCTCGAGCTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGAT 5271 Query 66436 GTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTG 66495 || || ||||| || || || || || || || || || | || || || || ||||| Sbjct 5272 ATCCGCGTGCCAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCGCCTTG 5331 Query 66496 GTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTT 66555 || ||||| ||||| | ||||| || || | ||| || || | || || || | Sbjct 5332 ATCAACGTATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACT 5391 Query 66556 GCCATTGGTGCCG 66568 ||||| || ||| Sbjct 5392 TCCATTCGTCCCG 5404 >seq1573 Length=148509 Score = 116 bits (128), Expect = 3e-21 Identities = 367/563 (65%), Gaps = 18/563 (3%) Strand=Plus/Plus Query 61084 GATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGAT 61143 || |||||| |||||| || || || || || ||| ||||| | || || ||||| Sbjct 117981 GAGATTTGGGACATGTATAAGAAAGCAGAGGCAAGCTTTTGGACCGCAGAAGAAATCGAT 118040 Query 61144 TTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||| | ||||||||||||||| | ||||| | |||| ||| || || ||| Sbjct 118041 TTGGTGCATGACATGAATGACTGGCTTAATATATCGGACAATGAAAGACACTTTATCAAA 118100 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTT----ATTGGA 61259 || |||||||| |||||||| || || || || |||||||| ||| | || || Sbjct 118101 CACGTGTTGGCCTTCTTTGCAGCCAGTGATGGAATTGTCAATGAAAATCTCGCCAT--GA 118158 Query 61260 ACGTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTG 61318 | |||| |||| ||||| || | | || || || || || ||||| || || |||| Sbjct 118159 A--TTTC-AGCAGTGAGGTTCAGATCCCCGAAGCTCGATGCTTTTACGGATTTCAAATTG 118215 Query 61319 CCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 | || || ||| | |||||||| |||| | | || ||||| ||||||| || | Sbjct 118216 CAATAGAAAATATACACTCGGAAGTGTATTCGTTATTGATTGATACATACATCAAAGATC 118275 Query 61379 GGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG 61438 | ||| | | || | || || || || || ||| || | |||| Sbjct 118276 CAACTGAAAAACAGCATTTACTGTGCGCGATTGAAACAATCCCGTGCGTTACCAATAAAG 118335 Query 61439 CGGATTGGGCCTTCAATTG----GATCACCAGTACAACGGCTACATTTGGTGAACGATTG 61494 | | ||||| || || || |||| |||| || | |||| ||| || || Sbjct 118336 CACAATGGGCGTTGAAATGGTGCGATCCAAAGTA----TGCCTCGTTTGCAGAAAGAGTG 118391 Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554 | || ||||||| ||||| || | |||||| ||||| || | | || |||||| Sbjct 118392 GTAGCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGCTCTATATTTTGG 118451 Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGAC 61614 |||||||||| ||| | ||||| || || ||| |||||| | || || || Sbjct 118452 CTGAAGAAACGAGGATTGATGCCTGGACTTTGCTTTTCAAATGAGCTCATCAGTCGTGAT 118511 Query 61615 GAGGGCATGCATTGTGATTTTGC 61637 || || | |||||||| ||||| Sbjct 118512 GAAGGACTACATTGTGACTTTGC 118534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397532827531760