Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq238 136 2e-30 seq12 104 1e-20 >seq238 Length=8787 Score = 136 bits (150), Expect = 2e-30 Identities = 101/117 (86%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| || ||||| || || ||||||| |||||| || || Sbjct 3326 GAACCCAAAGACTTTGATTTCTCATACGGTGCTGAACGGGTCAAAAA-ATAACACCGTCC 3384 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| ||||||||||||||| ||| |||||||||| ||||||| ||| ||||||| Sbjct 3385 AATCCCGAGTCGGCATAGTTTATGGTCAAGACTACGATGGTATCTAATCATCTTCGA 3441 >seq12 Length=1206637 Score = 104 bits (114), Expect = 1e-20 Identities = 95/119 (80%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT--AACATCGC 58 ||||||||||||||||||||||| || ||||| || |||| | || ||| | Sbjct 61088 GAACCCAAAGACTTTGATTTCTCATACGGTGCTGACAAGGTCATTCTAATTAAACGACTG 61147 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || ||||| ||||||||||||||| ||| |||||||||| ||||||| ||| ||||||| Sbjct 61148 CCAATCCCGAGTCGGCATAGTTTATGGTCAAGACTACGATGGTATCTAATCATCTTCGA 61206 Score = 104 bits (114), Expect = 1e-20 Identities = 95/119 (80%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT--AACATCGC 58 ||||||||||||||||||||||| || ||||| || |||| | || ||| | Sbjct 75631 GAACCCAAAGACTTTGATTTCTCATACGGTGCTGACAAGGTCATTCTAATTAAACGACTG 75690 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || ||||| ||||||||||||||| ||| |||||||||| ||||||| ||| ||||||| Sbjct 75691 CCAATCCCGAGTCGGCATAGTTTATGGTCAAGACTACGATGGTATCTAATCATCTTCGA 75749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278397820650