Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq13 123 3e-26 >seq13 Length=1183921 Score = 123 bits (136), Expect = 3e-26 Identities = 178/250 (71%), Gaps = 12/250 (5%) Strand=Plus/Minus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 |||||| ||||||||||| ||||| || ||||| || ||||| | || ||| | ||| Sbjct 725729 CTTCCAGCACCGGGCAGGTGTCAGACCCTATACGTCATCTTACGAT-TTAGCAGAGTCCT 725671 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGT 126 ||||||||| ||||||||||| ||| | ||||| || ||||| | | | ||| Sbjct 725670 GTGTTTTTATTAAACAGTCGCAACCCCCAATTCTGTG---CCACCTTCTTATTATTTCGT 725614 Query 127 CG--------TTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCG 178 || || | | | || || | ||||||||||||||| | | |||||||||| Sbjct 725613 CGATAAACATTTAAATAAAAAAGGTACTCTTTCTCCCGAAGTTACAGAGTCATTTTGCCG 725554 Query 179 AATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCG 238 | |||||| | || | || | | || ||||||| | ||| |||| |||||||||| Sbjct 725553 AGTTCCTTCAACATAATTATCTCATACACCTTAGTCTACTCGACCTATCCACCTGTGTTA 725494 Query 239 GTTTACGGTA 248 ||||| |||| Sbjct 725493 GTTTAGGGTA 725484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694394382955