Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq13 244 3e-62 seq83 125 2e-26 seq40 73.4 1e-10 >seq13 Length=1183921 Score = 244 bits (270), Expect = 3e-62 Identities = 214/268 (80%), Gaps = 9/268 (3%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | | ||||| |||||||||| | | ||||||||||| | ||||| Sbjct 725907 GCATCTTCACGGATAATTCAAATTCACTGAGTTTATGTTGGAGACAGCGGGGATGTCGTT 725848 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 725847 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 725788 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATC 192 |||||||||||||||||| ||| ||| || | || || ||| | | Sbjct 725787 GAGTTACGGCCGCCGTTTACTGGGACTTTTATTCAATGC---------GCAAACATCTCC 725737 Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252 ||||| ||||| |||||||||||| |||| |||||||||||| ||| || || |||| Sbjct 725736 TATTAATCTTCCAGCACCGGGCAGGTGTCAGACCCTATACGTCATCTTACGATTTAGCAG 725677 Query 253 AGTGCTGTGTTTTTAATAAACAGTCGCA 280 ||| ||||||||||| |||||||||||| Sbjct 725676 AGTCCTGTGTTTTTATTAAACAGTCGCA 725649 >seq83 Length=302471 Score = 125 bits (138), Expect = 2e-26 Identities = 96/114 (84%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | | ||||| |||||||||| | | ||||||||| | | ||||| Sbjct 167282 GCATCTTCACGGATAATTCAAATTCACTGAGTTTATGTTGGAGACAGTGGGGATGTCGTT 167223 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 || |||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 167222 ACACCATTCATGCAGGTCAGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 167169 >seq40 Length=520276 Score = 73.4 bits (80), Expect = 1e-10 Identities = 43/45 (96%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 85 CAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 129 || |||||||||||||||||||||||||||||||| ||||||||| Sbjct 484928 CATGTCGGAACTTACCCGACAAGGAATTTCGCTACGTTAGGACCG 484884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260789472320