Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq229 120 6e-25 seq16 120 6e-25 >seq229 Length=16518 Score = 120 bits (132), Expect = 6e-25 Identities = 130/170 (76%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||| | |||| |||||||| |||||| || ||||||||||| | ||| | Sbjct 11430 GCTGGATCAAGCTTTCGCCCATTGTCCAATATTCCTCACTGCTGCCTTTAAAAA-AGTTT 11372 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 |||||||||||||||||||||||||| | ||| || ||| | |||| |||||| || Sbjct 11371 GGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAATCAGCTAAAGATCGTAGG 11312 Query 127 CTTGGT-GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 |||||| | || ||| ||||||||||||||| |||| | | |||| Sbjct 11311 CTTGGTAAGTCTTTTAAACTACCAACTACCTAATCTTCCGCAAACTCATC 11262 >seq16 Length=1313120 Score = 120 bits (132), Expect = 6e-25 Identities = 130/170 (76%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||| | |||| |||||||| |||||| || ||||||||||| | ||| | Sbjct 530864 GCTGGATCAAGCTTTCGCCCATTGTCCAATATTCCTCACTGCTGCCTTTAAAAA-AGTTT 530922 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 |||||||||||||||||||||||||| | ||| || ||| | |||| |||||| || Sbjct 530923 GGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAATCAGCTAAAGATCGTAGG 530982 Query 127 CTTGGT-GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 |||||| | || ||| ||||||||||||||| |||| | | |||| Sbjct 530983 CTTGGTAAGTCTTTTAAACTACCAACTACCTAATCTTCCGCAAACTCATC 531032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998391663360