Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq238 138 1e-30 seq444 87.8 2e-15 seq12 87.8 2e-15 >seq238 Length=8787 Score = 138 bits (152), Expect = 1e-30 Identities = 162/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||||||||||||||||||||||||||| | ||||| Sbjct 3585 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAGTACATTCG 3644 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||| |||||| | ||| |||| ||| |||||||||||||||||| | || Sbjct 3645 AGCATAGGCCTTCTTTGAGCGATCTGATTTGTTCACGGTAAAAGTCCTGGTTCCCCGACA 3704 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAG-AGGTAGGGCTGGGTAATGCAGTACTCGC 182 || ||| |||| ||||| | || || ||| | | ||| | | | |||| | ||| Sbjct 3705 CACCCAGTGAAGGGCATGC-GGTTCTCCAGGAAAAAAGGCCCGACCCAGTCAGTGCACGC 3763 Query 183 CGTGAGGCGGACCATAGCACCCAGCCCGAGTTTC 216 |||||||||||| | || ||||| || ||| Sbjct 3764 GGTGAGGCGGACCGACGGGCCGAGCCCAAGGTTC 3797 >seq444 Length=8335 Score = 87.8 bits (96), Expect = 2e-15 Identities = 82/103 (80%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGG-ACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | ||| ||| ||||||||||||||||||||||| Sbjct 3421 AAACCAACAAAATAGACCACCAAGGTCGTATCTTATTATTCCATGCTAATGTATTCAAAT 3480 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 3481 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 3523 >seq12 Length=1206637 Score = 87.8 bits (96), Expect = 2e-15 Identities = 82/103 (80%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGG-ACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | ||| ||| ||||||||||||||||||||||| Sbjct 61353 AAACCAACAAAATAGACCACCAAGGTCGTATCTTATTATTCCATGCTAATGTATTCAAAT 61412 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 61413 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 61455 Score = 87.8 bits (96), Expect = 2e-15 Identities = 82/103 (80%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGG-ACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | ||| ||| ||||||||||||||||||||||| Sbjct 75896 AAACCAACAAAATAGACCACCAAGGTCGTATCTTATTATTCCATGCTAATGTATTCAAAT 75955 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 75956 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 75998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595195185390