Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq229 129 1e-27 seq16 111 4e-22 >seq229 Length=16518 Score = 129 bits (142), Expect = 1e-27 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 |||||||||| |||||||||| ||| || || |||| |||| |||| ||||||| Sbjct 11468 CTTTACAACCTATTAGCCTTCTTCACTCACTTGGTATTGCTGGATCAAGCTTTCGCCCAT 11409 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| ||||||||| ||||||||||| | ||| ||| |||||||||||| ||| || Sbjct 11408 TGTCCAATATTCCTCACTGCTGCCT-TTAAAAAAGTTTGGGCCGTGTCTCAGTCCCAATG 11350 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGT-GGGCCATTACCCCGC 182 |||||| |||| || ||| | |||||| |||||| | || ||| | | ||| | | Sbjct 11349 TGGCTGATCATTCTTTCAAATCAGCTAAAGATCGTAGGCTTGGTAAGTCTTTTAAACTAC 11290 Query 183 CAACTAGCTAATC 195 |||||| |||||| Sbjct 11289 CAACTACCTAATC 11277 >seq16 Length=1313120 Score = 111 bits (122), Expect = 4e-22 Identities = 121/158 (77%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 39 ATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAG 98 || |||| |||| |||| |||||||||| ||||||||| ||||||||||| | || Sbjct 530861 ATTGCTGGATCAAGCTTTCGCCCATTGTCCAATATTCCTCACTGCTGCCTTTAAAAA-AG 530919 Query 99 TCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGT 158 | ||| |||||||||||| ||| |||||||| |||| || ||| | |||||| |||||| Sbjct 530920 TTTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAATCAGCTAAAGATCGT 530979 Query 159 CGCCTAGGT-GGGCCATTACCCCGCCAACTAGCTAATC 195 | || ||| | | ||| | ||||||| |||||| Sbjct 530980 AGGCTTGGTAAGTCTTTTAAACTACCAACTACCTAATC 531017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222389792960