Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 2e-14 >seq5 Length=1915940 Score = 86.0 bits (94), Expect = 2e-14 Identities = 143/207 (69%), Gaps = 11/207 (5%) Strand=Plus/Minus Query 38 CCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTC 97 ||||||| ||||||||| ||| ||| ||||| ||||| || |||||| Sbjct 476427 CCGAAACTGAGTGATCTAATTATGAACAGATTGAAGAATAGGTAAAACTATTTGGAGGAT 476368 Query 98 CGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAAC 157 ||||||||| |||| | || || |||||||| |||| |||||||||||||| || | Sbjct 476367 CGAACCCACGTATGTGGCAATATACGGGGATGATTTGTGATTAGGGGTGAAAGGCCAATC 476308 Query 158 AAACTTGGA----------AATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC-CTC 206 ||||| || | ||||||||| || ||||| ||||| | |||| || | Sbjct 476307 AAACTCAGAGATACAGTACAGTAGCTGGTTTTCCGCGAAATCTATTGAAGTAGAGCATTT 476248 Query 207 AAGTATCACCATCGGGGGTAGAGCACT 233 || ||| | ||||||||||||| Sbjct 476247 AAAGATCTTTTTTTGGGGTAGAGCACT 476221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689585891840