Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq13 168 2e-39 seq83 111 5e-22 >seq13 Length=1183921 Score = 168 bits (186), Expect = 2e-39 Identities = 230/321 (72%), Gaps = 20/321 (6%) Strand=Plus/Minus Query 244 CCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGG 302 |||| ||| ||||||| | | ||| ||||| ||| | |||| ||||| | ||| Sbjct 725995 CCACTTATTCTACACATATTTTATAAAATAACAATATAAAGATGTAGTAAAGGTTCACGG 725936 Query 303 GGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGC 362 ||||||| |||| | ||| ||||||| || || | ||| ||||| | | Sbjct 725935 GGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTGAGT 725876 Query 363 CTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGAC 422 | || | |||||||| ||| |||||||| |||||| |||||||||||||||||||||| Sbjct 725875 TTATGTTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCCGAC 725816 Query 423 AAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAAT 482 |||||||||||||||||||||| || | |||||| ||||||||||||||| ||| | Sbjct 725815 AAGGAATTTCGCTACCTTAGGACCGTCAGAGTTACGGCCGCCGTTTACTGGGACTT---T 725759 Query 483 TACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGC 542 || ||| || || || |||| |||| ||||||||||||||| Sbjct 725758 TA-----TTCA-----------ATGCGCAAACATCTCCTATTAATCTTCCAGCACCGGGC 725715 Query 543 AGGCGTCAGTCCGTATACCTC 563 ||| ||||| || ||||| || Sbjct 725714 AGGTGTCAGACCCTATACGTC 725694 >seq83 Length=302471 Score = 111 bits (122), Expect = 5e-22 Identities = 93/114 (82%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 331 GCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTT 390 ||||||| || || | ||| ||||| | | | || | ||||||| ||| |||||| Sbjct 167282 GCATCTTCACGGATAATTCAAATTCACTGAGTTTATGTTGGAGACAGTGGGGATGTCGTT 167223 Query 391 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 444 || |||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 167222 ACACCATTCATGCAGGTCAGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 167169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702385784960