Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2068 223 6e-56 >seq2068 Length=15942 Score = 223 bits (246), Expect = 6e-56 Identities = 202/250 (81%), Gaps = 7/250 (3%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC----GAATACATTAGCA 129 |||||| |||||||||||||||||| ||||||||| ||||||| ||||||||||||| Sbjct 3705 TTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTCATTTGAATACATTAGCA 3764 Query 130 TGGAATAATAGAATAGGACGTGCG-GTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 |||||||||| ||| ||| | | | |||||||||||||||| | | | | |||||| Sbjct 3765 TGGAATAATAAGATACGACCTTGGTGGTCTATTTTGTTGGTTTGCACGCCAGG-GTAATG 3823 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||||||||| ||| |||||| | |||| | |||||||||||||||||||||| Sbjct 3824 ATTAATAGGGACAGTTGGGGGTATTCATATTTCAACGTCAGAGGTGAAATTCTTGGATCG 3883 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 | |||| | || |||||||| || ||||||||||||||||||||||| |||||| Sbjct 3884 TTGAAAGATGAGCTTAGGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGA 3942 Query 309 AAGTTAGGGG 318 |||| ||||| Sbjct 3943 AAGTCAGGGG 3952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915143065408