Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq1981 80.6 7e-13 >seq1981 Length=16353 Score = 80.6 bits (88), Expect = 7e-13 Identities = 85/112 (76%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| | || || ||| |||||||| | |||||||||||||||||||||||| || || Sbjct 14203 TACTTAAAAAAGAAGTTCCGGCTAATTTCGTGCCAGCAGCCGCGGTAATACGAGAGGAGC 14262 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAG 114 ||| ||| ||| ||| | | ||||||||| || | ||| ||| | |||| Sbjct 14263 GAGCATTATTCGAAATGATTAGGCGTAAAGGGTTTGTAGGTTGTTTTTTAAG 14314 Score = 80.6 bits (88), Expect = 7e-13 Identities = 77/99 (78%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 239 ATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAA 298 |||||||||||| ||||| | |||||| || | |||||||| |||| ||| | Sbjct 14441 ATGGCGAAGGCAATTATCTGGGTATATACTGACACTGAGAAACGAAAGCTTGGGTAGCGA 14500 Query 299 ACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 || ||||||||||||| ||||||||| || |||||||| Sbjct 14501 ACGGGATTAGATACCCCGGTAGTCCATGCTGTAAACGAT 14539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289519773984