Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq1981 131 2e-28 >seq1981 Length=16353 Score = 131 bits (144), Expect = 2e-28 Identities = 179/249 (72%), Gaps = 11/249 (4%) Strand=Plus/Plus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 |||||| ||||||||||| ||||| || ||||| || ||||| | || ||| | ||| Sbjct 11583 CTTCCAGCACCGGGCAGGTGTCAGACCCTATACGTCATCTTACGAT-TTAGCAGAGTCCT 11641 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGT 126 ||||||||| ||||||||||| ||| | ||||| ||| |||| | | | ||| Sbjct 11642 GTGTTTTTATTAAACAGTCGCAACCCCCAATTCTGTGC---CACCTTCTTATTATTTCGT 11698 Query 127 CGTTCACCAGC-------AGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 || | | || | || || | ||||||||||||||| | | ||||||||||| Sbjct 11699 CGATAAACATTTAAATAAAAAGGTACTCTTTCTCCCGAAGTTACAGAGTCATTTTGCCGA 11758 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||| | || | || | | || ||||||| | ||| |||| |||||||||| || Sbjct 11759 GTTCCTTCAACATAATTATCTCATACACCTTAGTCTACTCGACCTATCCACCTGTGTTGG 11818 Query 240 TTTACGGTA 248 |||| |||| Sbjct 11819 TTTAGGGTA 11827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694358151333