Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1981 248 2e-63 seq2200 111 3e-22 >seq1981 Length=16353 Score = 248 bits (274), Expect = 2e-63 Identities = 277/375 (74%), Gaps = 35/375 (9%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | | | ||| ||||| |||| ||| | ||||||| | | ||||| Sbjct 11405 GCATCTTCACGGATAATTCAAATTCACTGAGTTTATGTTGGAGACAGCGGGGATGTCGTT 11464 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || || ||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 11465 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 11524 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 ||||||||||||||||||||||| ||| ||| | ||| | |||| ||| Sbjct 11525 GAGTTACGGCCGCCGTTTACTGGGACTTTTATTC---------AATGCGCAAACATCTCC 11575 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| |||||||||||||||||| ||||| ||||||| || |||| ||| ||||||| Sbjct 11576 TATTAATCTTCCAGCACCGGGCAGGTGTCAGACCCTATACGTCATCTTACGATTTAGCAG 11635 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT----------- 295 | ||||||||||| ||||||||||| || ||||| ||| ||| Sbjct 11636 AGTCCTGTGTTTTTATTAAACAGTCGCAACCCCCAATTCTGTGCCACCTTCTTATTATTT 11695 Query 296 -GTC-------------ATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGC 341 ||| ||| | ||| || | ||||||| ||||||| | |||||||||| Sbjct 11696 CGTCGATAAACATTTAAATAAAAAGGTACTCTTTCTCCCGAAGTTACAGAGTCATTTTGC 11755 Query 342 CGAGTTCCTT-AACA 355 |||||||||| |||| Sbjct 11756 CGAGTTCCTTCAACA 11770 >seq2200 Length=23142 Score = 111 bits (122), Expect = 3e-22 Identities = 93/114 (82%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | | | ||| ||||| |||| ||| | ||||||||| | ||||| Sbjct 23088 GCATCTTCACGGATAATTCAAATTCACTGAGTTTATGTTGGAGACAGTGGGGATGTCGTT 23029 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 || || ||| ||| |||| ||||||||||||||||||||||||||||||||||| Sbjct 23028 ACACCATTCATGCAGGTCAGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 22975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062333908096