Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2068 387 2e-105 seq2343 307 2e-81 seq45 100 5e-19 >seq2068 Length=15942 Score = 387 bits (428), Expect = 2e-105 Identities = 244/264 (92%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 8592 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 8533 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| || |||||||| ||||| ||||||||||||||||| Sbjct 8532 TTAGTGGGTGAACAATCCAACAATTGGCGAATTCTACTTCGCAATGATAGGAAGAGCCGA 8473 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8472 CATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 8413 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||||| | | ||||||||||||| ||| Sbjct 8412 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCAAAAGAACTAAAGGATCGAGAGG 8353 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||||| |||||||||||| Sbjct 8352 CCACGCTTTCACGGTTTGTATTCA 8329 >seq2343 Length=10465 Score = 307 bits (340), Expect = 2e-81 Identities = 224/264 (85%), Gaps = 18/264 (7%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 553 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCGTA 612 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||| |||||| || |||||||| ||||| ||||||||||||||||| Sbjct 613 TTAGTGGGTGAACAGTCCAACAATTGGCGAATTCTACTTCGCAATGATAGGAAGAGCCGA 672 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| |||||||||||||||||||||||| ||||||||| Sbjct 673 CATCGAAGAATCAAAAAGCAACGTCGCTATGAA------------------CAGTTATCC 714 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||||| | | ||||||||||||| ||| Sbjct 715 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCAAAAGAACTAAAGGATCGAGAGG 774 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||||| |||||||||||| Sbjct 775 CCACGCTTTCACGGTTTGTATTCA 798 >seq45 Length=2487 Score = 100 bits (110), Expect = 5e-19 Identities = 75/88 (85%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 ||||||||||||||||||||| |||||||||| | ||||| | ||||||||||||| Sbjct 1 ATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCAAAACAACTAAAGGATCGA 60 Query 267 TAGGCCACACTTTCATGGTTTGTATTCA 294 ||||||| |||| | |||||||||||| Sbjct 61 CAGGCCACGCTTTTACGGTTTGTATTCA 88 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854346847776