Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq1981 143 6e-32 seq1629 86.0 1e-14 >seq1981 Length=16353 Score = 143 bits (158), Expect = 6e-32 Identities = 169/220 (77%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGA-CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCC 59 |||||||| || | | ||||||| ||| ||| || |||| |||||||| ||||||||| Sbjct 14174 CTTTACAA-CCTATTAGCCTTCTT-CACTCACTTGGTATTG-CTGGATCAAGCTTTCGCC 14118 Query 60 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 119 |||||||||||||||| ||||||||||| | ||| ||| |||||||||||| ||| Sbjct 14117 CATTGTCCAATATTCCTCACTGCTGCCT-TTAAAAAAGTTTGGGCCGTGTCTCAGTCCCA 14059 Query 120 GTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATT--ACC 177 |||| |||||||| || ||| | ||| || |||||| | |||||| || | || | | Sbjct 14058 ATGTGGCTGATCATTCTTTCAAATCAGCTAAAGATCGTAGGCTTGGTAAGTCTTTTAAAC 13999 Query 178 TCACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCG 217 | |||||||| |||||| | | |||||| |||||| Sbjct 13998 T-ACCAACTACCTAATCTTCCGCAAACTCATCCAATAGCG 13960 >seq1629 Length=1164 Score = 86.0 bits (94), Expect = 1e-14 Identities = 75/88 (85%), Gaps = 4/88 (5%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGA-CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCC 59 |||||||| || | | ||||||| ||| ||| || |||| |||||||| ||||||||| Sbjct 1077 CTTTACAA-CCTATTAGCCTTCTT-CACTCACTTGGTATTG-CTGGATCAAGCTTTCGCC 1133 Query 60 CATTGTCCAATATTCCCCACTGCTGCCT 87 |||||||||||||||| ||||||||||| Sbjct 1134 CATTGTCCAATATTCCTCACTGCTGCCT 1161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071933310880