Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1981 96.9 9e-18 >seq1981 Length=16353 Score = 96.9 bits (106), Expect = 9e-18 Identities = 150/208 (72%), Gaps = 10/208 (5%) Strand=Plus/Plus Query 195 AAAATAAG-TCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCC 253 ||||||| | |||| |||||||| |||||||||| | ||||| | ||| | || | Sbjct 12896 AAAATAAACTTGCTGGCCCATTATGCAAAAGGTACACTGTCACTTTATAAAAAAG-CTTC 12954 Query 254 CACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT-TTT 312 | || || | ||||| ||||||| || ||||||| | || | ||| ||| Sbjct 12955 AATTGATTATTAGCATAGAGTTTCAGAAT-TATTTCAAAC-----TCGAAAGCTCTATTT 13008 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | ||||||| | || ||||| ||||||||||||||| | | || | | ||| || |||| Sbjct 13009 CACCTTTCCTTTACAGTACTTGTTCACTATCGGTCATTAATTATTTTATAGATTTTGAGG 13068 Query 373 ATGGTCCCCCCATATTCAGACAAAGTTT 400 ||||||||| ||||||| | |||| || Sbjct 13069 GTGGTCCCCCAATATTCA-AAAAAGATT 13095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241522760064