Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq2068 82.4 5e-14 seq1509 75.2 7e-12 >seq2068 Length=15942 Score = 82.4 bits (90), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 44 AAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAG 103 || ||||||| || |||| || ||||||| ||||||||||| ||||||||||||||| Sbjct 4648 AATTTCTCACCGAGTCATT-CAATCGGTAGGT-GCGACGGGCGGTGTGTACAAAGGGCAG 4591 Query 104 GGACGTAATACAACGCAAGCT 124 ||||||||| ||| ||||||| Sbjct 4590 GGACGTAAT-CAATGCAAGCT 4571 >seq1509 Length=9552 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| ||||||||||| |||||||||||||||||||||||| ||| |||| Sbjct 9469 TTCAATCGGTAGGT-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAATGCAA 9526 Query 122 GCT 124 ||| Sbjct 9527 GCT 9529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300782456780