Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq1981 127 5e-27 >seq1981 Length=16353 Score = 127 bits (140), Expect = 5e-27 Identities = 143/190 (75%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAG 271 ||||||| || ||| || |||| |||||| | ||||| || ||| ||||| |||| Sbjct 12327 GCTTCGGTAAATTTCTTTAGTCCCGATACATTTTAGGCGCAAAAAAACTAGACCAATGAG 12386 Query 272 CTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAA 331 ||||||||| ||||| ||||||||||||||||||||| |||| |||||||| Sbjct 12387 CTATTACGCTTTCTTTAAAGGATGGCTGCTTCCAAGCCTACCTGTTGGTTGTCATTATTT 12446 Query 332 CTCCACATCCTTTCCCACTGAG-TCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGT 390 | ||| ||||||| |||| || | | ||| || ||||||| ||||||||||| Sbjct 12447 TTTCACTTCCTTTCTCACTTAGAAAATTATTTAAGGACCTTAGCGTTCAATCTGGGCTGT 12506 Query 391 TTCCCTCTCG 400 |||||||||| Sbjct 12507 TTCCCTCTCG 12516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177526741504