Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq1981 152 8e-35 >seq1981 Length=16353 Score = 152 bits (168), Expect = 8e-35 Identities = 198/271 (73%), Gaps = 6/271 (2%) Strand=Plus/Plus Query 8 GGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGC 67 || ||| |||||||||| |||||| |||||| || ||| |||||| | | || ||| Sbjct 10685 GGTTTCTTGCTTAGATGCTTTCAGCAATTATCCATTATAAATTTAGCTACTCGGCGTTGC 10744 Query 68 AC--TTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAG 125 | || || ||||| | | |||||| | ||| || |||||||||||||||| Sbjct 10745 TCCATT---AGAACAACCGATACACCAGTGATTTACCCTCTTCGGTCCTCTCGTACTAGA 10801 Query 126 GACAGCTCCTCTCAAATTTCC-TACGCCCACGACGGATAGGGACCGAACTGTCTCGCGAC 184 || || ||| |||| | | | |||||| || ||||||||| |||| Sbjct 10802 ATTAGAGTCTTTCATTTTTCAATTTATCTATAGAAGATAGGATCCAAACTGTCTCACGAC 10861 Query 185 GTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTAC 244 ||||| |||||| ||| ||| || ||||||| ||||||||||| ||||||||| |||| | Sbjct 10862 GTTCTAAACCCAACTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGAACCTTC 10921 Query 245 TTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||| |||||||| || ||| |||||||| Sbjct 10922 TTCAGCTCCAGGATGTGATGAGTCGACATCG 10952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780752944356