Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq1981 251 2e-64 seq1629 86.0 2e-14 seq728 86.0 2e-14 >seq1981 Length=16353 Score = 251 bits (278), Expect = 2e-64 Identities = 260/335 (78%), Gaps = 4/335 (1%) Strand=Plus/Plus Query 167 GATTAGCTAGTTGGTAAGGTAACGG-CTTACCAAGGCGACGATCAGTAGCCGACCTGAGA 225 |||||| ||||||||| ||| | ||||||||| | |||||| |||| || ||| | Sbjct 13983 GATTAGGTAGTTGGTAGTTTAAAAGACTTACCAAGCCTACGATCTTTAGCTGATTTGAAA 14042 Query 226 GGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGG 285 | ||||| |||||||||| |||||||||||| ||||||| | ||||||||||| Sbjct 14043 GAATGATCAGCCACATTGGGACTGAGACACGGCCCAAACTTTTTTAA-AGGCAGCAGTGA 14101 Query 286 GGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCT 345 ||||||||| ||||||||| ||||| |||| |||||| || ||||| || |||||| Sbjct 14102 GGAATATTGGACAATGGGCGAAAGCTTGATCCAGCAATACCAAGTGAGTGAAGAAGGCTA 14161 Query 346 TCGGGTCGTAAAGCTCTGTCCTCAAGGAAG-ATAATGACGGTACTTGAGGAGGAAGCCCC 404 ||| |||||||||| || | ||||||| | || ||| |||||| | | |||| || Sbjct 14162 ATAGGTTGTAAAGCTCTTTCATTAAGGAAGAAAAAAGACAGTACTTAAAAAAGAAGTTCC 14221 Query 405 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTAC 464 |||||| | |||||||||||||||||||||||| || || ||| |||| || ||| | Sbjct 14222 GGCTAATTTCGTGCCAGCAGCCGCGGTAATACGAGAGGAGCGAGCATTATTCGAAATGA- 14280 Query 465 TGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 | |||||||||||| |||||| |||| |||||| Sbjct 14281 TTAGGCGTAAAGGGTTTGTAGGTTGTTTTTTAAGT 14315 >seq1629 Length=1164 Score = 86.0 bits (94), Expect = 2e-14 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 274 AGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAG 333 ||||||||||| ||||||||| ||||||||| ||||| |||| |||||| || ||||| Sbjct 1161 AGGCAGCAGTGAGGAATATTGGACAATGGGCGAAAGCTTGATCCAGCAATACCAAGTGAG 1102 Query 334 CGATGAAGGCCTTCGGGTCGTAAAGCTCTGTC 365 || |||||| ||| |||||||||| || Sbjct 1101 TGAAGAAGGCTAATAGGTTGTAAAGCTCTTTC 1070 >seq728 Length=4377 Score = 86.0 bits (94), Expect = 2e-14 Identities = 73/89 (82%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 349 GGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGGCT 408 ||| |||||||||| || | |||||||| || ||| |||||| | || ||| ||||| Sbjct 1729 GGTTGTAAAGCTCTTTCATTAAGGAAGAAAAAGACAGTACTTAAAAAG-AAGTTTCGGCT 1787 Query 409 AACTACGTGCCAGCAGCCGCGGTAATACG 437 || | |||||||||||||||||||||||| Sbjct 1788 AATTTCGTGCCAGCAGCCGCGGTAATACG 1816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497506834304