Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2068 271 1e-70 >seq2068 Length=15942 Score = 271 bits (300), Expect = 1e-70 Identities = 250/313 (80%), Gaps = 5/313 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGC---CCGCTTTGGCGGGTCGCCGGCTTCT 76 || |||||||| | |||||||||| | || || ||||| ||| | ||||| Sbjct 4291 GAACGAGACCTCCGCGTGCTAAATAGTCCTGCTTACCAATTTGGTAGGTAAG-GACTTCT 4349 Query 77 TAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 135 |||||||||| || | | | | || ||||||| ||||||||||||||||||||||||| Sbjct 4350 TAGAGGGACTTTCAGTGACTAACTGAAGGAAGTTGGAGGCAATAACAGGTCTGTGATGCC 4409 Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTG 195 |||||||||||||||||||||||||||||||||| | |||||||| || |||||| Sbjct 4410 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGGTACGCTCAACGAGTATATAACCTTG 4469 Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 || |||||||||||||||| | || | ||||||| |||||||| ||||||||| Sbjct 4470 ATCGATAGGTCTGGGTAATCTTTTGAATACGTATCGTGCTAGGGATAGATTATTGCAATT 4529 Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 ||| |||| |||||||||| |||||||| ||| ||||||||| || ||||||||||| Sbjct 4530 ATTAATCTTGAACGAGGAATTCCTAGTAAACGCAAGTCATCAGCTTGCATTGATTACGTC 4589 Query 316 CCTGCCCTTTGTA 328 ||||||||||||| Sbjct 4590 CCTGCCCTTTGTA 4602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947141074688