Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1981 190 7e-46 seq2200 111 5e-22 >seq1981 Length=16353 Score = 190 bits (210), Expect = 7e-46 Identities = 338/490 (69%), Gaps = 35/490 (7%) Strand=Plus/Plus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||||| | |||||||||| ||||||||| | |||||||||| |||||||| |||| Sbjct 11162 ACCTTTGTACACCTCCGTTACTCTTTGGGAGGTGA-CCGCCCCAGTCAAACTACCAACCA 11220 Query 136 GGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGT 195 || |||| ||| || |||| ||| | | | |||||||| Sbjct 11221 TACATTGTCTGTCGTTAAGA--------CA---TTAGTTATTTATAATAATAAGAGTGGT 11269 Query 196 ATTTCAACAACGACTCCACAAC-CACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCT 254 ||||||| | || |||| ||||||| || | || || | |||| ||| || Sbjct 11270 ATTTCAAAGAAATCTAAACAATTCACTAGCATGAAGG--TCTAAGATTACCACTTATTCT 11327 Query 255 ACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGT 313 ||||| | | ||| ||||| ||| | |||| ||||| | |||||||||| ||| Sbjct 11328 ACACATATTTTATAAAATAACAATATAAAGATGTAGTAAAGGTTCACGGGGTCTTTCCGT 11387 Query 314 CCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAG 373 | | ||| ||||||| || || | ||| ||||| | | | || | ||| Sbjct 11388 CTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTGAGTTTATGTTGGAG 11447 Query 374 ACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCG 433 ||||| ||| |||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 11448 ACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCG 11507 Query 434 CTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCA 493 ||||||||||| || | |||||| ||||||||||||||| ||| ||| ||| Sbjct 11508 CTACCTTAGGACCGTCAGAGTTACGGCCGCCGTTTACTGGGACTT---TTA-----TTCA 11559 Query 494 CACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTC 553 || || || |||| |||| |||||||||||||||||| ||||| | Sbjct 11560 -----------ATGCGCAAACATCTCCTATTAATCTTCCAGCACCGGGCAGGTGTCAGAC 11608 Query 554 CGTATACCTC 563 | ||||| || Sbjct 11609 CCTATACGTC 11618 >seq2200 Length=23142 Score = 111 bits (122), Expect = 5e-22 Identities = 93/114 (82%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 331 GCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTT 390 ||||||| || || | ||| ||||| | | | || | ||||||| ||| |||||| Sbjct 23088 GCATCTTCACGGATAATTCAAATTCACTGAGTTTATGTTGGAGACAGTGGGGATGTCGTT 23029 Query 391 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 444 || |||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 23028 ACACCATTCATGCAGGTCAGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 22975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702294093696