Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq1981 104 5e-20 >seq1981 Length=16353 Score = 104 bits (114), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 7/216 (3%) Strand=Plus/Minus Query 67 TTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCAC--GCTACT 124 |||| |||| | || ||||| ||||||| | | | ||||| || |||| | || | Sbjct 14195 TTTTCTTCCTTAATGAAAGAGCTTTACAACCTATT-AGCCTTCTTCACTCACTTGGTATT 14137 Query 125 TGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGT 184 ||||| ||| || ||| |||||| |||||||||||||||||||||| | ||| Sbjct 14136 --GCTGGATCAAGCTTTCGCCCATTGTCCAATATTCCTCACTGCTGCCT-TTAAAAAAGT 14080 Query 185 TTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTA 244 |||| |||||||||||| ||||||||| || | | || ||| | | ||| |||||| Sbjct 14079 TTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAATCAGCTAAAGATCGTA 14020 Query 245 GGCTAGGT-GGGCCGTTACCCCGCCTACTACCTAAT 279 |||| ||| | | ||| | || |||||||||| Sbjct 14019 GGCTTGGTAAGTCTTTTAAACTACCAACTACCTAAT 13984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068733509952