Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2068 123 4e-26 seq788 89.7 8e-16 >seq2068 Length=15942 Score = 123 bits (136), Expect = 4e-26 Identities = 101/119 (85%), Gaps = 4/119 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCG-CGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAG 59 ||||||||||||||| ||| |||||| |||||||| ||| | | |||| || || Sbjct 8622 GTACGAGAGGAACCGTCGG--TTCAGA-TAATTGGTAAATGCAGTTAGCTGAAAAGCTAG 8678 Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 8679 TGCTGCGAAGCTACCATCTGTAGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 8737 >seq788 Length=4548 Score = 89.7 bits (98), Expect = 8e-16 Identities = 82/100 (82%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 4 CGAGAGGAACCG-CGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGC 62 |||||||||||| ||| |||||| |||||||| ||| | | |||| || ||||| Sbjct 4452 CGAGAGGAACCGTCGG--TTCAGA-TAATTGGTAAATGCAGTTAGCTGAAAAGCTAGTGC 4508 Query 63 CGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCT 102 |||||||||||||||| ||||||||||||||||||||| Sbjct 4509 TGCGAAGCTACCATCTGTAGGATTATGGCTGAACGCCTCT 4548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819150630144